RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ATP6AP2O75787 350 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 EPN2O95208 641 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 EGFP01133 1207 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 EPHX1P07099 455 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 HLA-DPA1P20036 260 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CD72P21854 359 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 SLC26A3P40879 764 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 WASP42768 502 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CBX5P45973 191 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 KCNC1P48547 511 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 UNC50Q53HI1 259 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 C2orf27AQ580R0 203 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ARMC12Q5T9G4 340 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 C8orf82Q6P1X6 216 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TPRG1Q6ZUI0 275 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ISCA2Q86U28 154 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 AQP12AQ8IXF9 295 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 REXO5Q96IC2 774 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CPEB1Q9BZB8 566 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TMEM245Q9H330 911 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ACOXLQ9NUZ1 547 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 DUSP12Q9UNI6 340 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 NOSIPQ9Y314 301 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 MTF2Q9Y483 593 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 MROH6A6NGR9 719 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CCL22O00626 93 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CLIC3O95833 236 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ALBP02768 609 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 FGF1P05230 155 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 DRD1P21728 446 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 HTR3AP46098 478 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 RPS9P46781 194 aaKnown RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 PRIM2P49643 509 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ARSDP51689 593 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 SLC7A2P52569 658 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 STEAP3Q658P3 488 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 LYPD8Q6UX82 237 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CYHR1Q6ZMK1 362 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 PSD4Q8NDX1 1056 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 OR10Z1Q8NGY1 313 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 CANT1Q8WVQ1 401 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 FAM3CQ92520 227 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ROPN1LQ96C74 230 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 TM9SF2Q99805 663 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 ING2Q9H160 280 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 PAQR5Q9NXK6 330 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-219ENST00000615335 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 GRIP1Q9Y3R0 1128 aa12.69□□□□□ -0.38
FOXN3-219ENST00000615335 LINC00854A0A1B0GVQ3 168 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 ANKRD66B4E2M5 251 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 NOS1APO75052 506 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 SOCS5O75159 536 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 SLC4A1P02730 911 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 GFAPP14136 432 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 GPX3P22352 226 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 KIR2DL1P43626 348 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 OR2B6P58173 313 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 HERVK_113P63132 956 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 NFKB2Q00653 900 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 KIF19Q2TAC6 998 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 FAM219BQ5XKK7 198 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 CCBE1Q6UXH8 406 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PIM3Q86V86 326 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 EXT2Q93063 718 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PMEPA1Q969W9 287 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 KCTD14Q9BQ13 255 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 ERVK-6Q9BXR3 956 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 SUV39H2Q9H5I1 410 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-219ENST00000615335 CA14Q9ULX7 337 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 SNX5Q9Y5X3 404 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 STON1Q9Y6Q2 735 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 OR51F1A6NGY5 319 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 BBIP1A8MTZ0 92 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 LEFTY1O75610 366 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 OR7A10O76100 309 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PGLSO95336 258 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PIRTP0C851 137 aa12.68□□□□□ -0.38
FOXN3-219ENST00000615335 PSMA4P25789 261 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms