RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TSSK3Q96PN8 268 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 GORASP2Q9H8Y8 452 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 CLDND1Q9NY35 253 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ZFR2Q9UPR6 939 aaKnown RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 V9GYQ6 96 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 CLOCKO15516 846 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 SH3BGRLO75368 114 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 MT-ND1P03886 318 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 PGRP06401 933 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 RAP2AP10114 183 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 SDC1P18827 310 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ACADLP28330 430 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 RPS14P62263 151 aaKnown RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 TBPL1P62380 186 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 CDK3Q00526 305 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 CYP4F3Q08477 520 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 DDX39BQ13838 428 aaKnown RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 RBBP5Q15291 538 aaKnown RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 CYBRD1Q53TN4 286 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 LIPJQ5W064 366 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 TTC33Q6PID6 262 aaPredicted RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 ADAMTSL4Q6UY14 1074 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 USP51Q70EK9 711 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 MSRB3Q8IXL7 192 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 KLHDC8AQ8IYD2 350 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 DHRSXQ8N5I4 330 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 OR2T12Q8NG77 320 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ADAMTS16Q8TE57 1224 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ATL1Q8WXF7 558 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 NEIL2Q969S2 332 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 EBPLQ9BY08 206 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ZDHHC5Q9C0B5 715 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 NTN4Q9HB63 628 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 SLC6A13Q9NSD5 602 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 PPT2Q9UMR5 302 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 GPR34Q9UPC5 381 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 OR1A2Q9Y585 309 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 A0A087WXM4 84 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 TRBV5-3A0A0A0MS03 114 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 PRR23AA6NEV1 266 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 UPK1AO00322 258 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 ETHE1O95571 254 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 AMD1P17707 334 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 PRPH2P23942 346 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
MMP28-204ENST00000615136 GTDC1Q4AE62 458 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 DNAJC14Q6Y2X3 702 aaPredicted RBP18.48■□□□□ 0.55
MMP28-204ENST00000615136 ZNF786Q8N393 782 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 CYGBQ8WWM9 190 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 CMTM7Q96FZ5 175 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 FBXL20Q96IG2 436 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 VPS50Q96JG6 964 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 OR52A5Q9H2C5 316 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 IKZF5Q9H5V7 419 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 SLC25A37Q9NYZ2 338 aa18.48■□□□□ 0.55
MMP28-204ENST00000615136 MGAT4DA6NG13 374 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 H3BSA7 217 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 VEGFDO43915 354 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 DEAF1O75398 565 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 LRATO95237 230 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 PAK4O96013 591 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 CDH15P55291 814 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 TSTA3Q13630 321 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 C11orf91Q3C1V1 193 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 FAM98BQ52LJ0 330 aaKnown RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 TMEM196Q5HYL7 178 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 CATSPEREQ5SY80 951 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 PATL1Q86TB9 770 aaKnown RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 SYTL1Q8IYJ3 562 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 OR52E4Q8NGH9 312 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 DNAJB8Q8NHS0 232 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 GFM2Q969S9 779 aaKnown RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 IL17FQ96PD4 163 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 PLAGL1Q9UM63 463 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 AP3M1Q9Y2T2 418 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 C17orf113A0A1B0GUU1 675 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 SLC5A2P31639 672 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 ADARB1P78563 741 aaKnown RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 STARD3Q14849 445 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 RUNDC3AQ59EK9 446 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 LRRC56Q8IYG6 542 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 FBXO15Q8NCQ5 510 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 MAGEE2Q8TD90 523 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 TMIGD2Q96BF3 282 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 ZNF514Q96K75 400 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 SH3GL1Q99961 368 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 OSBPL6Q9BZF3 934 aa18.47■□□□□ 0.55
MMP28-204ENST00000615136 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 RSL24D1Q9UHA3 163 aaKnown RBP18.47■□□□□ 0.55
MMP28-204ENST00000615136 NPIPB8E9PQR5 432 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 UGDHO60701 494 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 GMNNO75496 209 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 FUCA1P04066 466 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 NPPBP16860 134 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 C5AR1P21730 350 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 RPL10P27635 214 aaKnown RBP18.46■□□□□ 0.55
MMP28-204ENST00000615136 CDK9P50750 372 aaKnown RBP18.46■□□□□ 0.55
MMP28-204ENST00000615136 CLDN8P56748 225 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 IRF4Q15306 451 aa18.46■□□□□ 0.55
MMP28-204ENST00000615136 GRHL2Q6ISB3 625 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms