RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 MRGPRX3Q96LB0 322 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 HOPXQ9BPY8 73 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 CD244Q9BZW8 370 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 KCTD5Q9NXV2 234 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 PLXNB3Q9ULL4 1909 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 TCRBV5S2A0A599 114 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 NNMTP40261 264 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 CASP3P42574 277 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 MESP2Q0VG99 397 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 CRY1Q16526 586 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 HIST2H2ACQ16777 129 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-208ENST00000613073 PAGE3Q5JUK9 113 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 IRAK1BP1Q5VVH5 260 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 RALGPS2Q86X27 583 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-208ENST00000613073 ATL1Q8WXF7 558 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 VMP1Q96GC9 406 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 ZFYVE19Q96K21 471 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 NODALQ96S42 347 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 C19orf43Q9BQ61 176 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 BDH2Q9BUT1 245 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 SLC52A3Q9NQ40 469 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 ARL15Q9NXU5 204 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 ASPDHA6ND91 283 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 H0YAE9 185 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 DYRK3O43781 588 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 IL12AP29459 219 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 RPIAP49247 311 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 DAG1Q14118 895 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 DHCR24Q15392 516 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 C12orf40Q86WS4 652 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 MTFMTQ96DP5 389 aaKnown RBP15.99■□□□□ 0.15
CNOT3-208ENST00000613073 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 NTN4Q9HB63 628 aa15.99■□□□□ 0.15
CNOT3-208ENST00000613073 CAB39Q9Y376 341 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-208ENST00000613073 KRT8P05787 483 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 GSNP06396 782 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 OR56A5P0C7T3 313 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 G6PDP11413 515 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ENDOUP21128 410 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PSMB9P28065 219 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ZFP36L2P47974 494 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 MRPS15P82914 257 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PLIN5Q00G26 463 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 AP5B1Q2VPB7 878 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 RFTN2Q52LD8 501 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 STEAP3Q658P3 488 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 SULT1C3Q6IMI6 304 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PSRC1Q6PGN9 363 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 LYSMD2Q8IV50 215 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 DEPDC4Q8N2C3 294 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 CELF2-AS1Q8N7Q2 184 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 DMRTB1Q96MA1 342 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 A0A1W2PP18 115 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 CCDC154A6NI56 674 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 OR2AG2A6NM03 316 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ZNF99A8MXY4 864 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 LOC730098B7Z3J9 87 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ALDH3A2P51648 485 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 POLR2JP52435 117 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PTPN5P54829 565 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 HMGCS1Q01581 520 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 RCAN2Q14206 197 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 BRAT1Q6PJG6 821 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 CNIH3Q8TBE1 160 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PROKR1Q8TCW9 393 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 OSCP1Q8WVF1 389 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ZNF707Q96C28 371 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 FAM83DQ9H4H8 585 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 MOV10Q9HCE1 1003 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 INVSQ9Y283 1065 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 TESMINQ9Y4I5 508 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ALPLP05186 524 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ATP1B2P14415 290 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 TIMP2P16035 220 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 SERPINB10P48595 397 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 RBM48Q5RL73 367 aaKnown RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 TMEM125Q96AQ2 219 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 PYCR2Q96C36 320 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 RSPRY1Q96DX4 576 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 BRINP2Q9C0B6 783 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 DSN1Q9H410 356 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 ITM2BQ9Y287 266 aa15.98■□□□□ 0.15
CNOT3-208ENST00000613073 POLR3HQ9Y535 204 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-208ENST00000613073 CXorf51AA0A1B0GTR3 108 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 WASH3PC4AMC7 463 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 RGS13O14921 159 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 XPAP23025 273 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 DGKGP49619 791 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 OR4D2P58180 307 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 EMX1Q04741 257 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 DMC1Q14565 340 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 SNAP47Q5SQN1 464 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 FAM109BQ6ICB4 259 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 ADGRD2Q7Z7M1 963 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 SYTL1Q8IYJ3 562 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 MINDY1Q8N5J2 469 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 TP53INP1Q96A56 240 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 RIOK2Q9BVS4 552 aaKnown RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 AMBRA1Q9C0C7 1298 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms