RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SNX19Q92543 992 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 NCLNQ969V3 563 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 NXPE3Q969Y0 559 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 KXD1Q9BQD3 176 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 ELOVL6Q9H5J4 265 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 IL36AQ9UHA7 158 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 NAALAD2Q9Y3Q0 740 aa14.25□□□□□ -0.13
CDH1-213ENST00000612417 A0A1W2PQ67 120 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PRRT4C9JH25 899 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 SLC16A6O15403 523 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 NOBOXO60393 691 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 DNAJB5O75953 348 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 SERPINA1P01009 418 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 MPC1LP0DKB6 136 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 IL7RP16871 459 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 SDC1P18827 310 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PTSQ03393 145 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ADAM15Q13444 863 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 LAPTM5Q13571 262 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ZNF829Q3KNS6 432 aaPredicted RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 POM121L1PQ3SYA9 428 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 HS3ST5Q8IZT8 346 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 C10orf111Q8N326 155 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 CPA6Q8N4T0 437 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 FBLIM1Q8WUP2 373 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 MTFMTQ96DP5 389 aaKnown RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 PYURFQ96I23 114 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 FCRL1Q96LA6 429 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 MAGEB10Q96LZ2 347 aaPredicted RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 MYADMQ96S97 322 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ADNPQ9H2P0 1102 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PPT2Q9UMR5 302 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 SLC16A5O15375 505 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PFDN1O60925 122 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 HTR1AP08908 422 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 CD247P20963 164 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 LHCGRP22888 699 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 XPAP23025 273 aaPredicted RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 RYKP34925 604 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ISL1P61371 349 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ZNF33BQ06732 778 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 CD47Q08722 323 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 MTAPQ13126 283 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 C16orf72Q14CZ0 275 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 CTU2Q2VPK5 515 aaKnown RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 ZNF691Q5VV52 312 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ANKRD26P1Q6NSI1 321 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 BRAT1Q6PJG6 821 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 DET1Q7L5Y6 550 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 TMEM179BQ7Z7N9 219 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 TANKQ92844 425 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 BORCS5Q969J3 196 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 ZNF566Q969W8 418 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 HSPBAP1Q96EW2 488 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 INPP5KQ9BT40 448 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PLA2G2FQ9BZM2 168 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 LHPPQ9H008 270 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 GABARAPL1Q9H0R8 117 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 B4GALT6Q9UBX8 382 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 TMEFF2Q9UIK5 374 aaPredicted RBP14.24□□□□□ -0.13
CDH1-213ENST00000612417 XIRP2A4UGR9 3374 aa14.24□□□□□ -0.13
CDH1-213ENST00000612417 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 LOC100130705A0A1B0GUX0 176 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 TBC1D3BA6NDS4 549 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 GFYI3L273 518 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 CCNDBP1O95273 360 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 ITGAMP11215 1152 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 TACR1P25103 407 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 RAD23AP54725 363 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 RUNX3Q13761 415 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 DPY19L1Q2PZI1 675 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 GAB4Q2WGN9 574 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 PLEKHS1Q5SXH7 462 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 LAIR2Q6ISS4 152 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 SHQ1Q6PI26 577 aaKnown RBP14.23□□□□□ -0.13
CDH1-213ENST00000612417 Q6ZNX1 250 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 SERPINA11Q86U17 422 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
CDH1-213ENST00000612417 CSGALNACT1Q8TDX6 532 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 TBCCD1Q9NVR7 557 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 CLEC1BQ9P126 229 aa14.23□□□□□ -0.13
CDH1-213ENST00000612417 SAMD4AQ9UPU9 718 aaKnown RBP14.23□□□□□ -0.13
CDH1-213ENST00000612417 NUP214P35658 2090 aaPredicted RBP14.23□□□□□ -0.13
CDH1-213ENST00000612417 HS6ST1O60243 411 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PRMT3O60678 531 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 E2F6O75461 281 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 CTSLP07711 333 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HIST1H2AGP0C0S8 130 aaPredicted RBP14.22□□□□□ -0.13
CDH1-213ENST00000612417 CCDC159P0C7I6 412 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HLA-EP13747 358 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 AMD1P17707 334 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HIST1H2ADP20671 130 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 MAP4P27816 1152 aaKnown RBP14.22□□□□□ -0.13
CDH1-213ENST00000612417 CDKN2CP42773 168 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TRPC1P48995 793 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TPD52P55327 224 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms