RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 PRR20BP86481 221 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PRR20AP86496 221 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 MEF2AQ02078 507 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 KLF10Q13118 480 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 DDX39BQ13838 428 aaKnown RBP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SLBPQ14493 270 aaKnown RBP eCLIP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SQLEQ14534 574 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 ARHGAP19Q14CB8 494 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 NAA25Q14CX7 972 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 IMPG1Q17R60 797 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 WDR45BQ5MNZ6 344 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 METTL21CQ5VZV1 264 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 LIPJQ5W064 366 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 FRG2Q64ET8 278 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PMS2CLQ68D20 193 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 ADNP2Q6IQ32 1131 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 NXPE4Q6UWF7 544 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 LCTLQ6UWM7 567 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 Q6ZSR9 355 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 CHSY3Q70JA7 882 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 C17orf64Q86WR6 236 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 FAM20CQ8IXL6 584 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 RAB42Q8N4Z0 105 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 OR2L8Q8NGY9 312 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 HMGCLL1Q8TB92 370 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 LMX1AQ8TE12 382 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SLC5A11Q8WWX8 675 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SELENOMQ8WWX9 145 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 USP7Q93009 1102 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SH3KBP1Q96B97 665 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PTCD3Q96EY7 689 aaKnown RBP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 FRG2BQ96QU4 278 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 ACPTQ9BZG2 426 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SPNS1Q9H2V7 528 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SMOC1Q9H4F8 434 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 ELOVL6Q9H5J4 265 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 KIR3DX1Q9H7L2 352 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 TXLNGQ9NUQ3 528 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 RIC8BQ9NVN3 520 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 CUEDC1Q9NWM3 386 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SPHK1Q9NYA1 384 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 GPRC5BQ9NZH0 403 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 SNX6Q9UNH7 406 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 CCL27Q9Y4X3 112 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 KCNE2Q9Y6J6 123 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 COLEC10Q9Y6Z7 277 aa7.8□□□□□ -1.16
TARDBP-213ENST00000611963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 MED19A0JLT2 244 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 C9JVG2 144 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 SLC28A1O00337 649 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 LSM1O15116 133 aaKnown RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 VILLO15195 856 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 UGDHO60701 494 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 SDC3O75056 442 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 VPS4BO75351 444 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 SH3BGRLO75368 114 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ULK1O75385 1050 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 UNC5CO95185 931 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 CSF2P04141 144 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 C1GALT1C1LP0DN25 315 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ESRRAP11474 423 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 PCNAP12004 261 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 GNAZP19086 355 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 CCND1P24385 295 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 NDUFS1P28331 727 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 HNF4AP41235 474 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 CASP2P42575 452 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 DIO3P55073 304 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 MAZP56270 477 aaKnown RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 C21orf59P57076 290 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 UBE2IP63279 158 aaKnown RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 PCDH1Q08174 1060 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 LAPTM4AQ15012 233 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 TBCCQ15814 346 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 KIF19Q2TAC6 998 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ATP6AP1LQ52LC2 224 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 C6orf136Q5SQH8 315 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 LYSMD4Q5XG99 296 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ATG9BQ674R7 924 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 DESI1Q6ICB0 168 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 TCEAL6Q6IPX3 200 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 IYDQ6PHW0 289 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 RINLQ6ZS11 566 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ERMP1Q7Z2K6 904 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 SNX32Q86XE0 403 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ZNF761Q86XN6 746 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 KIF2BQ8N4N8 673 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 CPSF7Q8N684 471 aaKnown RBP7.79□□□□□ -1.16
TARDBP-213ENST00000611963 FNDC5Q8NAU1 212 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 ZNF740Q8NDX6 193 aa7.79□□□□□ -1.16
TARDBP-213ENST00000611963 OR4E2Q8NGC2 313 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms