RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FBXO15Q8NCQ5 510 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DDHD1Q8NEL9 900 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 WFDC5Q8TCV5 224 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 LMX1AQ8TE12 382 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HIST1H2ACQ93077 130 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TRIM43Q96BQ3 446 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SHDQ96IW2 340 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 COL21A1Q96P44 957 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 OR2M4Q96R27 311 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TPT1P8Q9HAU6 139 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 KLHL1Q9NR64 748 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DDX28Q9NUL7 540 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ACSL5Q9ULC5 683 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CA14Q9ULX7 337 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 OAZ3Q9UMX2 235 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ASCC3Q8N3C0 2202 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HLA-DQA2P01906 255 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 LYNP07948 512 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 RAP2AP10114 183 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 IL7RP16871 459 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 MPIP34949 423 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 LARS2Q15031 903 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 FAM78AQ5JUQ0 283 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GPR151Q8TDV0 419 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TSACCQ96A04 125 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ARMC5Q96C12 935 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC7A6OSQ96CW6 309 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 MYRFLQ96LU7 910 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 RBM4BQ9BQ04 359 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 RBM4Q9BWF3 364 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC17A9Q9BYT1 436 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 C1orf21Q9H246 121 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CWH43Q9H720 699 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ANKHQ9HCJ1 492 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 EVA1BQ9NVM1 165 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DNAAF2Q9NVR5 837 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HSFX1Q9UBD0 423 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SNX7Q9UNH6 387 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PDE10AQ9Y233 779 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PCDHB11Q9Y5F2 797 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PCDHGB3Q9Y5G1 929 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PRSS51A0A1B0GVH4 220 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF860A6NHJ4 632 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 AQP12BA6NM10 295 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 CHURC1-FNTBB4DL54 471 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 M0QX08 132 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 RTCAO00442 366 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 MAN1A2O60476 641 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 SAGP10523 405 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PRDX3P30048 256 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 ADRA1AP35348 466 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PXNP49023 591 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DEFA1P59665 94 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DEFA3P59666 94 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 ERVPABLB-1P60509 514 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PTSQ03393 145 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DLG1Q12959 904 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 GANABQ14697 944 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 C16orf72Q14CZ0 275 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 RBM44Q6ZP01 1051 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PRR23BQ6ZRT6 265 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 RFLNAQ6ZTI6 216 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PARS2Q7L3T8 475 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 AQP12AQ8IXF9 295 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 SMYD1Q8NB12 490 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PIK3C3Q8NEB9 887 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 TEX47Q8TBZ9 253 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 SNRNP27Q8WVK2 155 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 NCSTNQ92542 709 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 POP5Q969H6 163 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 ADI1Q9BV57 179 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 HRASLS2Q9NWW9 162 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 TOR4AQ9NXH8 423 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 LHX3Q9UBR4 397 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PCTPQ9UKL6 214 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 EMCNQ9ULC0 261 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DOCK3Q8IZD9 2030 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PNMA8CA0A1B0GUJ8 204 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 BCKDKO14874 412 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 BCKDHAP12694 445 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 GNSP15586 552 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PCSK2P16519 638 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 PFKLP17858 780 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 SEPHS1P49903 392 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 FOXA1P55317 472 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 TRIM16LQ309B1 348 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 IFI44LQ53G44 452 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 TMEM240Q5SV17 173 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DCST1Q5T197 706 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 FAAH2Q6GMR7 532 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DENND5AQ6IQ26 1287 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 LIPIQ6XZB0 460 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 MACC1Q6ZN28 852 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF563Q8TA94 476 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 WDR92Q96MX6 357 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 NECTIN4Q96NY8 510 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 DPYSL5Q9BPU6 564 aa7.05□□□□□ -1.28
CSDE1-218ENST00000610726 NOL6Q9H6R4 1146 aaKnown RBP7.05□□□□□ -1.28
CSDE1-218ENST00000610726 AMBNQ9NP70 447 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms