RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 HUS1BQ8NHY5 278 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 KLHL29Q96CT2 875 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 CMTM7Q96FZ5 175 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 PRAP1Q96NZ9 151 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 C1orf50Q9BV19 199 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 SDR39U1Q9NRG7 319 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.32■□□□□ 0.36
VRK3-225ENST00000601912 AIG1Q9NVV5 245 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 NMRK1Q9NWW6 199 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ADGRE2Q9UHX3 823 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 PILRBQ9UKJ0 227 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 TSC22D4Q9Y3Q8 395 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 BDP1A6H8Y1 2624 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 NPIPB8E9PQR5 432 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 FOXE1O00358 373 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 PIAS2O75928 621 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 CTSKP43235 329 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 DIO3P55073 304 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 MEF2AQ02078 507 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 BIRC2Q13490 618 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ZNF528Q3MIS6 628 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 AGKQ53H12 422 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 IL23RQ5VWK5 629 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ADCK2Q7Z695 626 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ADGRF3Q8IZF5 1079 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 POU5F2Q8N7G0 328 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 OR4K1Q8NGD4 311 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ZC3H10Q96K80 434 aaKnown RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 CUEDC1Q9NWM3 386 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 SPHK1Q9NYA1 384 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 VPS29Q9UBQ0 182 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 TMED5Q9Y3A6 229 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 GPR45Q9Y5Y3 372 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 SDK1Q7Z5N4 2213 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 BTN3A3O00478 584 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 GPX3P22352 226 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 PTPN4P29074 926 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 GRK3P35626 688 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 PIK3CBP42338 1070 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 CPA2P48052 419 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 MRPL19P49406 292 aaKnown RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 ARRB1P49407 418 aaPredicted RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 YBX1P67809 324 aaKnown RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 ACTN3Q08043 901 aaPredicted RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 RBBP5Q15291 538 aaKnown RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 PDCD4Q53EL6 469 aaKnown RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 CACHD1Q5VU97 1274 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 TMEM26Q6ZUK4 368 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 OR2L3Q8NG85 312 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 PIGKQ92643 395 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 NELL1Q92832 810 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 METTL2AQ96IZ6 378 aaKnown RBP17.31■□□□□ 0.36
VRK3-225ENST00000601912 BRINP2Q9C0B6 783 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 NT5DC2Q9H857 520 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 TMEM74BQ9NUR3 256 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 TMEM184CQ9NVA4 438 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 CCDC167Q9P0B6 97 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 ENTPD2Q9Y5L3 495 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 SNX11Q9Y5W9 270 aa17.31■□□□□ 0.36
VRK3-225ENST00000601912 OR6C74A6NCV1 312 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 B2RBV5 119 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SDC3O75056 442 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 PCSK2P16519 638 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 MAPK1P28482 360 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 PEBP1P30086 187 aaKnown RBP17.3■□□□□ 0.36
VRK3-225ENST00000601912 AVPR2P30518 371 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SERPINB1P30740 379 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 DPP6P42658 865 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 MXRA7P84157 204 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 REEP5Q00765 189 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 PAOXQ6QHF9 649 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SFTPA2Q8IWL1 248 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 TBC1D19Q8N5T2 526 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SLC7A6OSQ96CW6 309 aaPredicted RBP17.3■□□□□ 0.36
VRK3-225ENST00000601912 LRMDAQ9H2I8 198 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SPNS1Q9H2V7 528 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 TMEM45AQ9NWC5 275 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 ASIC5Q9NY37 505 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 SNX7Q9UNH6 387 aa17.3■□□□□ 0.36
VRK3-225ENST00000601912 POLR3HQ9Y535 204 aaPredicted RBP17.3■□□□□ 0.36
VRK3-225ENST00000601912 ANKDD1BA6NHY2 528 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 GPR37L1O60883 481 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 DNAJC8O75937 253 aaPredicted RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 FASLGP48023 281 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 NME5P56597 212 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RPS13P62277 151 aaKnown RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 CSNK1G2P78368 415 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 KIAA0040Q15053 153 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 DEFB133Q30KQ1 61 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ASRGL1Q7L266 308 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RNF175Q8N4F7 328 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ARL14Q8N4G2 192 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ZNF740Q8NDX6 193 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 OR10G6Q8NH81 332 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms