RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PRAP1Q96NZ9 151 aa20.15■□□□□ 0.82
PNKP-209ENST00000596726 ADNPQ9H2P0 1102 aa20.15■□□□□ 0.82
PNKP-209ENST00000596726 GEMIN8Q9NWZ8 242 aaKnown RBP20.15■□□□□ 0.82
PNKP-209ENST00000596726 SH2B3Q9UQQ2 575 aa20.15■□□□□ 0.82
PNKP-209ENST00000596726 CFAP46Q8IYW2 2715 aa20.15■□□□□ 0.82
PNKP-209ENST00000596726 MED13Q9UHV7 2174 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 HYKKA2RU49 373 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 PABPN1LA6NDY0 278 aaKnown RBP20.14■□□□□ 0.81
PNKP-209ENST00000596726 FAM155BO75949 473 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 MED26O95402 600 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 EMP3P54852 163 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 POLE2P56282 527 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 CDKL1Q00532 357 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 ZKSCAN8Q15776 578 aaPredicted RBP20.14■□□□□ 0.81
PNKP-209ENST00000596726 FAM69BQ5VUD6 431 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 MLIPQ5VWP3 458 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 CAPN13Q6MZZ7 669 aaPredicted RBP20.14■□□□□ 0.81
PNKP-209ENST00000596726 ZNF843Q8N446 348 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 ATL1Q8WXF7 558 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 THAP4Q8WY91 577 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 DERL2Q9GZP9 239 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 TSPYL1Q9H0U9 437 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 NINJ2Q9NZG7 142 aa20.14■□□□□ 0.81
PNKP-209ENST00000596726 IFT80Q9P2H3 777 aaPredicted RBP20.14■□□□□ 0.81
PNKP-209ENST00000596726 NPEPPSL1A6NEC2 478 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 HAT1O14929 419 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 PHGDHO43175 533 aaKnown RBP20.13■□□□□ 0.81
PNKP-209ENST00000596726 CNOT3O75175 753 aaKnown RBP20.13■□□□□ 0.81
PNKP-209ENST00000596726 GUCA1CO95843 209 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 EIF2S1P05198 315 aaKnown RBP20.13■□□□□ 0.81
PNKP-209ENST00000596726 CD63P08962 238 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 SFTPCP11686 197 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 STMN1P16949 149 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 EFTUD2Q15029 972 aaKnown RBP eCLIP20.13■□□□□ 0.814e-7■■■□□ 19.2
PNKP-209ENST00000596726 COX15Q7KZN9 410 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 IFT81Q8WYA0 676 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 PYCR2Q96C36 320 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 C10orf90Q96M02 699 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 OR4K3Q96R72 315 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 FUT8Q9BYC5 575 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 CTNNAL1Q9UBT7 734 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 NDOR1Q9UHB4 597 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 GPN3Q9UHW5 284 aaPredicted RBP20.13■□□□□ 0.81
PNKP-209ENST00000596726 TUBD1Q9UJT1 453 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 PADI2Q9Y2J8 665 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 OARD1Q9Y530 152 aa20.13■□□□□ 0.81
PNKP-209ENST00000596726 BSNQ9UPA5 3926 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 RAB10P61026 200 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 CSNK1G2P78368 415 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 KCNAB2Q13303 367 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 SLC9A5Q14940 896 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 TSNQ15631 228 aaKnown RBP20.12■□□□□ 0.81
PNKP-209ENST00000596726 UBAP2Q5T6F2 1119 aaKnown RBP20.12■□□□□ 0.81
PNKP-209ENST00000596726 OVCH1Q7RTY7 1134 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 ADCK2Q7Z695 626 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 ADAMTSL2Q86TH1 951 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 C17orf64Q86WR6 236 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 PLD3Q8IV08 490 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 APLFQ8IW19 511 aaPredicted RBP20.12■□□□□ 0.81
PNKP-209ENST00000596726 ARHGEF39Q8N4T4 335 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 DTWD1Q8N5C7 304 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 CSNK1A1LQ8N752 337 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 FKBP10Q96AY3 582 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 ALKBH8Q96BT7 664 aaKnown RBP20.12■□□□□ 0.81
PNKP-209ENST00000596726 UBXN10Q96LJ8 280 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 FMO2Q99518 471 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 HAUS8Q9BT25 410 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 MAN2B2Q9Y2E5 1009 aa20.12■□□□□ 0.81
PNKP-209ENST00000596726 TLN1Q9Y490 2541 aaKnown RBP20.12■□□□□ 0.81
PNKP-209ENST00000596726 PCSK5Q92824 1860 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 KCNE1BA0A087WTH5 132 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 ALBP02768 609 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 ANXA5P08758 320 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 CCDC166P0CW27 439 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 PIM1P11309 404 aaPredicted RBP20.11■□□□□ 0.81
PNKP-209ENST00000596726 MUM1Q2TAK8 710 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 ABHD11Q8NFV4 315 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 OR4K1Q8NGD4 311 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 OR2Y1Q8NGV0 311 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.11■□□□□ 0.81
PNKP-209ENST00000596726 RERGQ96A58 199 aaPredicted RBP20.11■□□□□ 0.81
PNKP-209ENST00000596726 SLC26A1Q9H2B4 701 aa20.11■□□□□ 0.81
PNKP-209ENST00000596726 CDC42EP4Q9H3Q1 356 aaKnown RBP20.11■□□□□ 0.81
PNKP-209ENST00000596726 RUVBL1Q9Y265 456 aaKnown RBP20.11■□□□□ 0.81
PNKP-209ENST00000596726 TXNDC9O14530 226 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 CDH1P12830 882 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 CD1DP15813 335 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 PHBP35232 272 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 OR1D4P47884 311 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 PMS2P54278 862 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 ATP6V0D1P61421 351 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 RPS15AP62244 130 aaKnown RBP20.1■□□□□ 0.81
PNKP-209ENST00000596726 C19orf57Q0VDD7 668 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 SSPNQ14714 243 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 HKDC1Q2TB90 917 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 GARNL3Q5VVW2 1013 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 PRMT9Q6P2P2 845 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 VN1R4Q7Z5H5 301 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 SPATA6LQ8N4H0 392 aa20.1■□□□□ 0.81
PNKP-209ENST00000596726 THAP11Q96EK4 314 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms