RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 UNKQ9C0B0 810 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 GPAMQ9HCL2 828 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 TXLNGQ9NUQ3 528 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ARL15Q9NXU5 204 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 UTP6Q9NYH9 597 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NINJ2Q9NZG7 142 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NOVA2Q9UNW9 492 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 HYKKA2RU49 373 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HMX2A2RU54 273 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 H7BY64 318 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 DSCR3O14972 297 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 P2RX6O15547 441 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 GUCA1CO95843 209 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 ENO2P09104 434 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HIST1H2AGP0C0S8 130 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 EZRP15311 586 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 NPPBP16860 134 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HIST1H2ADP20671 130 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 AGXTP21549 392 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 CSRP3P50461 194 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 ARSFP54793 590 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 CSNK1G2P78368 415 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 RELAQ04206 551 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 USP10Q14694 798 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 TSNQ15631 228 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HKDC1Q2TB90 917 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 GLE1Q53GS7 698 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 YOD1Q5VVQ6 348 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 LCTLQ6UWM7 567 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 SPATA6LQ8N4H0 392 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 METTL27Q8N6F8 245 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 APOBEC4Q8WW27 367 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HIST1H2AHQ96KK5 128 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 PRAP1Q96NZ9 151 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 HIST1H2AJQ99878 128 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 ARHGAP9Q9BRR9 750 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 H2AFJQ9BTM1 129 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 FAM129AQ9BZQ8 928 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 DERL2Q9GZP9 239 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 CDC42EP4Q9H3Q1 356 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 TMEM184CQ9NVA4 438 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 GEMIN8Q9NWZ8 242 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 TXNDC16Q9P2K2 825 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 SNX7Q9UNH6 387 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 POLHQ9Y253 713 aa10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 RUVBL1Q9Y265 456 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 UBR5O95071 2799 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-206ENST00000595523 C9J4A7 227 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 DNAJB5O75953 348 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 STATHP02808 62 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 EIF2S1P05198 315 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 UMODP07911 640 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CCDC166P0CW27 439 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CDH1P12830 882 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CD1DP15813 335 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ALAS2P22557 587 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CCND1P24385 295 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CCR10P46092 362 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ILF2Q12905 390 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 DLG1Q12959 904 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 NAB1Q13506 487 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 C18orf21Q32NC0 220 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 GRTP1Q5TC63 336 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CPZQ66K79 652 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CAPN13Q6MZZ7 669 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 VN1R4Q7Z5H5 301 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ADCK2Q7Z695 626 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CMC1Q7Z7K0 106 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 C17orf64Q86WR6 236 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CSNK1A1LQ8N752 337 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CEP112Q8N8E3 955 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 TTC29Q8NA56 475 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 IFT81Q8WYA0 676 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ALKBH8Q96BT7 664 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 PTERQ96BW5 349 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 TSPAN17Q96FV3 270 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 UBXN10Q96LJ8 280 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 FMO2Q99518 471 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 DHRS4Q9BTZ2 278 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 FUT8Q9BYC5 575 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 TRIM54Q9BYV2 358 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 TRIM55Q9BYV6 548 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 PCBD2Q9H0N5 130 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ADNPQ9H2P0 1102 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 ACSS3Q9H6R3 686 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 IFT80Q9P2H3 777 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 CTNNAL1Q9UBT7 734 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 MTRF1LQ9UGC7 380 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 NDOR1Q9UHB4 597 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 OARD1Q9Y530 152 aa10.48□□□□□ -0.73
SHKBP1-206ENST00000595523 RP1L1Q8IWN7 2480 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 KCNE1BA0A087WTH5 132 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 FEZF1A0PJY2 475 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 EIF4E1BA6NMX2 242 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 LCMT2O60294 686 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC35E2BP0CK96 405 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 STMN1P16949 149 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms