RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ALOX12BO75342 701 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 C8GP07360 202 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 VARSP26640 1264 aaKnown RBP22.36■■□□□ 1.17
LSM4-204ENST00000594828 DR1Q01658 176 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 SRSF1Q07955 248 aaKnown RBP eCLIP22.36■■□□□ 1.17
LSM4-204ENST00000594828 TUBB8Q3ZCM7 444 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 HP1BP3Q5SSJ5 553 aaPredicted RBP22.36■■□□□ 1.17
LSM4-204ENST00000594828 GARNL3Q5VVW2 1013 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 PAQR3Q6TCH7 311 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 PRSS58Q8IYP2 241 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 ANP32BQ92688 251 aaKnown RBP22.36■■□□□ 1.17
LSM4-204ENST00000594828 MVB12AQ96EY5 273 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 CCDC138Q96M89 665 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 PRAP1Q96NZ9 151 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 CCDC177Q9NQR7 707 aaPredicted RBP22.36■■□□□ 1.17
LSM4-204ENST00000594828 CUEDC1Q9NWM3 386 aaPredicted RBP22.36■■□□□ 1.17
LSM4-204ENST00000594828 ADAMTS6Q9UKP5 1117 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 B3GNT3Q9Y2A9 372 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 SAR1BQ9Y6B6 198 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 PRPF4O43172 522 aaKnown RBP eCLIP22.35■■□□□ 1.17
LSM4-204ENST00000594828 GNLYP22749 145 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 ELK3P41970 407 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 UQCRFS1P47985 274 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 PRR30Q53SZ7 412 aaPredicted RBP22.35■■□□□ 1.17
LSM4-204ENST00000594828 VWA2Q5GFL6 755 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 RBM20Q5T481 1227 aaKnown RBP22.35■■□□□ 1.17
LSM4-204ENST00000594828 IRAK1BP1Q5VVH5 260 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 MYO1HQ8N1T3 1032 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 ZADH2Q8N4Q0 377 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 OR11G2Q8NGC1 345 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 YIPF2Q9BWQ6 316 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 PARVBQ9HBI1 364 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 TMEM184CQ9NVA4 438 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 MAP10Q9P2G4 905 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 C3orf18Q9UK00 162 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 PDE10AQ9Y233 779 aa22.35■■□□□ 1.17
LSM4-204ENST00000594828 SPENQ96T58 3664 aaKnown RBP22.35■■□□□ 1.17
LSM4-204ENST00000594828 IGLV3-12A0A075B6K2 115 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 HAT1O14929 419 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 HRH2P25021 359 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 CDKN2DP55273 166 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 DSG2Q14126 1118 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 TEDDM1Q5T9Z0 273 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 GALNT7Q86SF2 657 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 PLD3Q8IV08 490 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 PARP9Q8IXQ6 854 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 MMABQ96EY8 250 aaPredicted RBP22.34■■□□□ 1.17
LSM4-204ENST00000594828 CFAP36Q96G28 342 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 PWWP2AQ96N64 755 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 NAPGQ99747 312 aaPredicted RBP22.34■■□□□ 1.17
LSM4-204ENST00000594828 PCBD2Q9H0N5 130 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 ZBTB20Q9HC78 741 aaPredicted RBP22.34■■□□□ 1.17
LSM4-204ENST00000594828 TRPC4Q9UBN4 977 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 CHMP2BQ9UQN3 213 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 NBASA2RRP1 2371 aa22.34■■□□□ 1.17
LSM4-204ENST00000594828 SLC16A5O15375 505 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 ANXA5P08758 320 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 SLC26A3P40879 764 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 TBPL1P62380 186 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 SP140Q13342 867 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 AGAP7PQ5VUJ5 663 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 HIBCHQ6NVY1 386 aaPredicted RBP22.33■■□□□ 1.17
LSM4-204ENST00000594828 LAPTM4BQ86VI4 370 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 IQCKQ8N0W5 287 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 LRRC39Q96DD0 335 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 AGAP4Q96P64 663 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 DRC3Q9H069 523 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 ILKAPQ9H0C8 392 aaPredicted RBP22.33■■□□□ 1.17
LSM4-204ENST00000594828 PLAC1Q9HBJ0 212 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 SLC17A6Q9P2U8 582 aa22.33■■□□□ 1.17
LSM4-204ENST00000594828 CCDC188H7C350 402 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 FOXS1O43638 330 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 HIST1H2AGP0C0S8 130 aaPredicted RBP22.32■■□□□ 1.16
LSM4-204ENST00000594828 ACPPP15309 386 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 HIST1H2ADP20671 130 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 PAFAH1B1P43034 410 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 IL2P60568 153 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 PDAP1Q13442 181 aaKnown RBP22.32■■□□□ 1.16
LSM4-204ENST00000594828 HIF1AQ16665 826 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 NDUFA9Q16795 377 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 ATG9BQ674R7 924 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 AGTRAPQ6RW13 159 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 LINGO1Q96FE5 620 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 THOC3Q96J01 351 aaKnown RBP22.32■■□□□ 1.16
LSM4-204ENST00000594828 HIST1H2AHQ96KK5 128 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 HIST1H2AJQ99878 128 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 TRIM51Q9BSJ1 452 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 H2AFJQ9BTM1 129 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 LHPPQ9H008 270 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 ATG10Q9H0Y0 220 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 TEX264Q9Y6I9 313 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 NUP210LQ5VU65 1888 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 HEATR5BQ9P2D3 2071 aa22.32■■□□□ 1.16
LSM4-204ENST00000594828 RELNP78509 3460 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 A0A0A6YYC8 382 aaPredicted RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 I3L1I5 382 aaPredicted RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 MAP2K7O14733 419 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 FFAR3O14843 346 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 GPR42O15529 346 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 P2RX6O15547 441 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms