RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NOXRED1Q6NXP6 359 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 HORMAD1Q86X24 394 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 CRIPAKQ8N1N5 446 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 TTC29Q8NA56 475 aaPredicted RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 ZNF540Q8NDQ6 660 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 HIST1H2AHQ96KK5 128 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 HIST1H2AJQ99878 128 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 H2AFJQ9BTM1 129 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SLC12A9Q9BXP2 914 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ZNF334Q9HCZ1 680 aaPredicted RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 AGAP14A8MT82 685 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 GFRA2O00451 464 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 HOXA2O43364 376 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ABLIM3O94929 683 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 FKBP9O95302 570 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 FABP3P05413 133 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 CD70P32970 193 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 GSSP48637 474 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 STK19P49842 368 aaPredicted RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 SF1Q15637 639 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 VMACQ2NL98 169 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 GGTA1PQ4G0N0 100 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 CAPN13Q6MZZ7 669 aaPredicted RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 PRSS48Q7RTY5 328 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ARMC8Q8IUR7 673 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SYT12Q8IV01 421 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ZZZ3Q8IYH5 903 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SLC7A5P1Q8MH63 180 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 UBE2FQ969M7 185 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 TRMT2BQ96GJ1 504 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 P2RY13Q9BPV8 354 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 BBS2Q9BXC9 721 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ACOT13Q9NPJ3 140 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 RASSF1Q9NS23 344 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SCN3BQ9NY72 215 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SLCO3A1Q9UIG8 710 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 VPS4AQ9UN37 437 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ERVK-11Q9UQG0 969 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 PRRG1O14668 218 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 KCNK5O95279 499 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 DNAJA1P31689 397 aaKnown RBP15.98■□□□□ 0.15
LIG1-206ENST00000594067 EIF2DP41214 584 aaKnown RBP15.98■□□□□ 0.15
LIG1-206ENST00000594067 CTSOP43234 321 aaPredicted RBP15.98■□□□□ 0.15
LIG1-206ENST00000594067 TM4SF4P48230 202 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 SLC13A2Q13183 592 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 KEAP1Q14145 624 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 DUOXA1Q1HG43 343 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 FRG2Q64ET8 278 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 Q6ZNB5 142 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 SERPINA11Q86U17 422 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 CLECL1Q8IZS7 167 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 PSMA8Q8TAA3 256 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 FRG2BQ96QU4 278 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 CTRCQ99895 268 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 CD84Q9UIB8 345 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 OSGIN1Q9UJX0 560 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 SAMHD1Q9Y3Z3 626 aaKnown RBP15.98■□□□□ 0.15
LIG1-206ENST00000594067 HOXA9P31269 272 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 KDELR2P33947 212 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 MAPK8P45983 427 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 SLC6A12P48065 614 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 PTSQ03393 145 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 CDC20Q12834 499 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 CHIT1Q13231 466 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 UGT8Q16880 541 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 TPRG1Q6ZUI0 275 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 LACC1Q8IV20 430 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 FAM9CQ8IZT9 166 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 L3MBTL4Q8NA19 623 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 SCLYQ96I15 445 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 HSH2DQ96JZ2 352 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 KIF17Q9P2E2 1029 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 ZNF229Q9UJW7 825 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 PNMA8BQ9ULN7 279 aaPredicted RBP15.98■□□□□ 0.15
LIG1-206ENST00000594067 HSPE1-MOB4S4R3N1 261 aa15.98■□□□□ 0.15
LIG1-206ENST00000594067 NUP214P35658 2090 aaPredicted RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 PABPN1LA6NDY0 278 aaKnown RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 FAM20BO75063 409 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 MTX2O75431 263 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 LATS1O95835 1130 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 OR56A5P0C7T3 313 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 ZNF24P17028 368 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 HOXB6P17509 224 aaKnown RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 FPR1P21462 350 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 LHCGRP22888 699 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 PRPH2P23942 346 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 PDE12Q6L8Q7 609 aaKnown RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 SERPINA13PQ6UXR4 307 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 PTOV1Q86YD1 416 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 OR2AP1Q8NGE2 309 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 ASB11Q8WXH4 323 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 DNAJC11Q9NVH1 559 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 FAM8A1Q9UBU6 413 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 SCN8AQ9UQD0 1980 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 EPN2O95208 641 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms