RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TAC3Q9UHF0 121 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 ZGRF1Q86YA3 2104 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 IGHV1-45A0A0A0MS14 117 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 STSP08842 583 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 EZRP15311 586 aaKnown RBP22.73■■□□□ 1.23
LSM4-202ENST00000593564 CLCN7P51798 805 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 TSTA3Q13630 321 aaPredicted RBP22.73■■□□□ 1.23
LSM4-202ENST00000593564 TICAM1Q8IUC6 712 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 FBXO15Q8NCQ5 510 aaPredicted RBP22.73■■□□□ 1.23
LSM4-202ENST00000593564 RERGQ96A58 199 aaPredicted RBP22.73■■□□□ 1.23
LSM4-202ENST00000593564 MMABQ96EY8 250 aaPredicted RBP22.73■■□□□ 1.23
LSM4-202ENST00000593564 YIPF2Q9BWQ6 316 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 RIC8BQ9NVN3 520 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 ABCA12Q86UK0 2595 aa22.73■■□□□ 1.23
LSM4-202ENST00000593564 LOC102723996A0A087X1L8 192 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 TRAV17A0A0B4J275 112 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 TXNDC9O14530 226 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 FFAR3O14843 346 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 GPR42O15529 346 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 AVILO75366 819 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 BMP10O95393 424 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 SLC16A8O95907 504 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 HEXBP07686 556 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 ANXA5P08758 320 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 MAGEA6P43360 314 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 TNFSF10P50591 281 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 ABATP80404 500 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 SARNPP82979 210 aaKnown RBP22.72■■□□□ 1.23
LSM4-202ENST00000593564 EEF1A2Q05639 463 aaKnown RBP22.72■■□□□ 1.23
LSM4-202ENST00000593564 KCNJ11Q14654 390 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 ZRSR2Q15696 482 aaKnown RBP22.72■■□□□ 1.23
LSM4-202ENST00000593564 INAQ16352 499 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 TTLL9Q3SXZ7 439 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 ZNF324BQ6AW86 544 aaPredicted RBP22.72■■□□□ 1.23
LSM4-202ENST00000593564 RIPOR1Q6ZS17 1223 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 REXO1L1PQ8IX06 675 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 SLC34A3Q8N130 599 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 HAS2Q92819 552 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 DRC3Q9H069 523 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 HOMER3Q9NSC5 361 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 KLHL42Q9P2K6 505 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 MRPS2Q9Y399 296 aaKnown RBP22.72■■□□□ 1.23
LSM4-202ENST00000593564 CROCCQ5TZA2 2017 aa22.72■■□□□ 1.23
LSM4-202ENST00000593564 HEATR5BQ9P2D3 2071 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.71■■□□□ 1.23
LSM4-202ENST00000593564 ENO4A6NNW6 628 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 GOLGA6L6A8MZA4 724 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 E7ENX8 843 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 FOXS1O43638 330 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 JRKO75564 520 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 TAP2Q03519 686 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 SIRT6Q8N6T7 355 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 GIMAP7Q8NHV1 300 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 ZNF480Q8WV37 535 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 SLC30A3Q99726 388 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 PLA2G3Q9NZ20 509 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 PCYOX1Q9UHG3 505 aa22.71■■□□□ 1.23
LSM4-202ENST00000593564 A0A1B0GUH1 482 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 SMAPO00193 183 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 TDGF1P3P51864 188 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 FAM53BQ14153 422 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 TRIP13Q15645 432 aaPredicted RBP22.7■■□□□ 1.22
LSM4-202ENST00000593564 KCTD19Q17RG1 926 aaPredicted RBP22.7■■□□□ 1.22
LSM4-202ENST00000593564 C1QL3Q5VWW1 255 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 ZNF470Q6ECI4 717 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 FAAH2Q6GMR7 532 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 CASC4Q6P4E1 433 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 TMEM205Q6UW68 189 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 ZNF662Q6ZS27 426 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 CAND1Q86VP6 1230 aaKnown RBP22.7■■□□□ 1.22
LSM4-202ENST00000593564 ZC3H7AQ8IWR0 971 aaKnown RBP22.7■■□□□ 1.22
LSM4-202ENST00000593564 PRELID2Q8N945 189 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 PPFIBP2Q8ND30 876 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 ASB11Q8WXH4 323 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 KCNJ9Q92806 393 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 MAGEB10Q96LZ2 347 aaPredicted RBP22.7■■□□□ 1.22
LSM4-202ENST00000593564 TAAR6Q96RI8 345 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 ZNF700Q9H0M5 742 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 SAMD15Q9P1V8 674 aa22.7■■□□□ 1.22
LSM4-202ENST00000593564 A0A0A6YYC8 382 aaPredicted RBP22.69■■□□□ 1.22
LSM4-202ENST00000593564 FAM237BA0A1B0GVD1 139 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 I3L1I5 382 aaPredicted RBP22.69■■□□□ 1.22
LSM4-202ENST00000593564 P2RX6O15547 441 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 CEP104O60308 925 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 ZG16O60844 167 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 WFS1O76024 890 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 AP2B1P63010 937 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 DHX34Q14147 1143 aaKnown RBP22.69■■□□□ 1.22
LSM4-202ENST00000593564 PCOLCEQ15113 449 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 NR4A3Q92570 626 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 EBNA1BP2Q99848 306 aaKnown RBP22.69■■□□□ 1.22
LSM4-202ENST00000593564 LZTFL1Q9NQ48 299 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 MED16Q9Y2X0 877 aa22.69■■□□□ 1.22
LSM4-202ENST00000593564 MAGEB16A2A368 324 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 GFYI3L273 518 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 HAT1O14929 419 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 CELA2AP08217 269 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 MPC1LP0DKB6 136 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 ICAM2P13598 275 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 ENO3P13929 434 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms