RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ACTL8Q9H568 366 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 NOVA2Q9UNW9 492 aaKnown RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 MRPS2Q9Y399 296 aaKnown RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 SCN2AQ99250 2005 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 FEZF1A0PJY2 475 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ZNF839A8K0R7 811 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ESPNB1AK53 854 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 TAPBPO15533 448 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 LCMT2O60294 686 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 MT-ND3P03897 115 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ALDOAP04075 364 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 C2P06681 752 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ALAS2P22557 587 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 GCAP28676 217 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 PHBP35232 272 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 OR1D4P47884 311 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 PMS2P54278 862 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 AP1S2P56377 157 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ABATP80404 500 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 IL10RAQ13651 578 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 TBR1Q16650 682 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 PRTGQ2VWP7 1150 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 LINC00303Q3SY05 128 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ZC3H12BQ5HYM0 836 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 MLIPQ5VWP3 458 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 RHBDD2Q6NTF9 364 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 TLDC1Q6P9B6 456 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 RAPH1Q70E73 1250 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 VN1R4Q7Z5H5 301 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 CENPLQ8N0S6 344 aaPredicted RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 ENDOVQ8N8Q3 282 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 ZNF740Q8NDX6 193 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 DCAKDQ8WVC6 231 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 RHBDF1Q96CC6 855 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 C10orf90Q96M02 699 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 PAFAH2Q99487 392 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 EGFL8Q99944 293 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ZFYVE21Q9BQ24 234 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 TRIM54Q9BYV2 358 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 SEMA4CQ9C0C4 833 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ALG9Q9H6U8 611 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ANKZF1Q9H8Y5 726 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 SNX15Q9NRS6 342 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 CUTCQ9NTM9 273 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ZNF358Q9NW07 568 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.01□□□□□ -0.65
VMP1-211ENST00000591315 NDOR1Q9UHB4 597 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 SNX7Q9UNH6 387 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 FARSAQ9Y285 508 aaKnown RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 OARD1Q9Y530 152 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 ASB1Q9Y576 335 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 AP1M2Q9Y6Q5 423 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 MAU2Q9Y6X3 613 aa11.01□□□□□ -0.65
VMP1-211ENST00000591315 V9GYY5 206 aaPredicted RBP11.01□□□□□ -0.65
VMP1-211ENST00000591315 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
VMP1-211ENST00000591315 A0A087WUV0 522 aaPredicted RBP11□□□□□ -0.65
VMP1-211ENST00000591315 HYKKA2RU49 373 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CDC14CA4D256 554 aa11□□□□□ -0.65
VMP1-211ENST00000591315 ZNF891A8MT65 544 aaPredicted RBP11□□□□□ -0.65
VMP1-211ENST00000591315 FFAR3O14843 346 aa11□□□□□ -0.65
VMP1-211ENST00000591315 GPR42O15529 346 aa11□□□□□ -0.65
VMP1-211ENST00000591315 RIPK2O43353 540 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CREG1O75629 220 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CCNDBP1O95273 360 aa11□□□□□ -0.65
VMP1-211ENST00000591315 PRB1P04280 392 aa11□□□□□ -0.65
VMP1-211ENST00000591315 KLK3P07288 261 aaPredicted RBP11□□□□□ -0.65
VMP1-211ENST00000591315 ENO2P09104 434 aaPredicted RBP11□□□□□ -0.65
VMP1-211ENST00000591315 TFEBP19484 476 aa11□□□□□ -0.65
VMP1-211ENST00000591315 PTPN4P29074 926 aa11□□□□□ -0.65
VMP1-211ENST00000591315 BCL6P41182 706 aa11□□□□□ -0.65
VMP1-211ENST00000591315 GLRBP48167 497 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CDC20Q12834 499 aa11□□□□□ -0.65
VMP1-211ENST00000591315 LY6DQ14210 128 aa11□□□□□ -0.65
VMP1-211ENST00000591315 TGFBIQ15582 683 aa11□□□□□ -0.65
VMP1-211ENST00000591315 DEFB109BQ30KR1 87 aa11□□□□□ -0.65
VMP1-211ENST00000591315 NKAIN1Q4KMZ8 207 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CAPN13Q6MZZ7 669 aaPredicted RBP11□□□□□ -0.65
VMP1-211ENST00000591315 LCTLQ6UWM7 567 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CEP128Q6ZU80 1094 aa11□□□□□ -0.65
VMP1-211ENST00000591315 FRA10AC1Q70Z53 315 aa11□□□□□ -0.65
VMP1-211ENST00000591315 COX15Q7KZN9 410 aa11□□□□□ -0.65
VMP1-211ENST00000591315 ADAMTSL2Q86TH1 951 aa11□□□□□ -0.65
VMP1-211ENST00000591315 ISCA2Q86U28 154 aa11□□□□□ -0.65
VMP1-211ENST00000591315 THOC6Q86W42 341 aaKnown RBP11□□□□□ -0.65
VMP1-211ENST00000591315 C17orf64Q86WR6 236 aa11□□□□□ -0.65
VMP1-211ENST00000591315 GPSM1Q86YR5 675 aa11□□□□□ -0.65
VMP1-211ENST00000591315 CSNK1A1LQ8N752 337 aa11□□□□□ -0.65
VMP1-211ENST00000591315 EXD3Q8N9H8 876 aa11□□□□□ -0.65
VMP1-211ENST00000591315 ANKRD7Q92527 254 aa11□□□□□ -0.65
VMP1-211ENST00000591315 NEIL2Q969S2 332 aa11□□□□□ -0.65
VMP1-211ENST00000591315 TMEM79Q9BSE2 394 aa11□□□□□ -0.65
VMP1-211ENST00000591315 NDC1Q9BTX1 674 aa11□□□□□ -0.65
VMP1-211ENST00000591315 TSPYL1Q9H0U9 437 aa11□□□□□ -0.65
VMP1-211ENST00000591315 TMEM184CQ9NVA4 438 aa11□□□□□ -0.65
VMP1-211ENST00000591315 RUVBL1Q9Y265 456 aaKnown RBP11□□□□□ -0.65
VMP1-211ENST00000591315 SLC22A14Q9Y267 594 aa11□□□□□ -0.65
VMP1-211ENST00000591315 A0A096LPK6 155 aa10.99□□□□□ -0.65
VMP1-211ENST00000591315 FITM1A5D6W6 292 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms