RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ANKRD28O15084 1053 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PRICKLE3O43900 615 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 NRP2O60462 931 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 SLC22A3O75751 556 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 CCNDBP1O95273 360 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 VIPP01282 170 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 AMD1P17707 334 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 XRCC1P18887 633 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 CAPN3P20807 821 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 CXCR2P25025 360 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PEBP1P30086 187 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PGM1P36871 562 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 ZFP36L2P47974 494 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 KCNK10P57789 538 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 UFM1P61960 85 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 RPS13P62277 151 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 UBE2IP63279 158 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 YBX1P67809 324 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 ABATP80404 500 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PRDX1Q06830 199 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 C1orf61Q13536 156 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PTGR1Q14914 329 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 KIR2DS5Q14953 304 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 ZNF423Q2M1K9 1284 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 MMEL1Q495T6 779 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PRRT3Q5FWE3 981 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 COQ5Q5HYK3 327 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 TMIGD1Q6UXZ0 262 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 WDR5BQ86VZ2 330 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 AMIGO1Q86WK6 493 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 LIX1Q8N485 282 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PROKR1Q8TCW9 393 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 TSPEARQ8WU66 669 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 ZFPM2Q8WW38 1151 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PATE1Q8WXA2 126 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 JPH3Q8WXH2 748 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 SPDL1Q96EA4 605 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 APIPQ96GX9 242 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 METTL2AQ96IZ6 378 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 TEX37Q96LM6 180 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 AIF1LQ9BQI0 150 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 MRPL1Q9BYD6 325 aaKnown RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PITHD1Q9GZP4 211 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-205ENST00000588745 ACTL8Q9H568 366 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 EFCAB1Q9HAE3 211 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 DMRT3Q9NQL9 472 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 DLGAP4Q9Y2H0 992 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 PCM1Q15154 2024 aa10.98□□□□□ -0.65
SMAD4-205ENST00000588745 TRBV23OR9-2A0A075B6M9 112 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 FAM234BA2RU67 622 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 C9JVG2 144 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 FOXE1O00358 373 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 MRASO14807 208 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ANGPT2O15123 496 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 VILLO15195 856 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 LAMTOR5O43504 91 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ETHE1O95571 254 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 CHRM5P08912 532 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PRPS2P11908 318 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 BCKDHAP12694 445 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PCSK2P16519 638 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SERPINB1P30740 379 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PIK3CBP42338 1070 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ELF3P78545 371 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ACSM2AQ08AH3 577 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ART3Q13508 389 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 GPR18Q14330 331 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PLCL1Q15111 1095 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ELOCQ15369 112 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SPIN4Q56A73 249 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ACSM2BQ68CK6 577 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 HACD2Q6Y1H2 254 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 DEFB107AQ8IZN7 70 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 FAM9CQ8IZT9 166 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PGAM4Q8N0Y7 254 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 NAGSQ8N159 534 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ZNF740Q8NDX6 193 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 OR2L3Q8NG85 312 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 OR4K1Q8NGD4 311 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SLC37A2Q8TED4 501 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ZDHHC1Q8WTX9 485 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 APOLD1Q96LR9 279 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 TWSG1Q9GZX9 223 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 RHBGQ9H310 441 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SRMSQ9H3Y6 488 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 NT5DC2Q9H857 520 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 MRPS30Q9NP92 439 aaKnown RBP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SLC52A3Q9NQ40 469 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 NMRK1Q9NWW6 199 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 SPHK1Q9NYA1 384 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 CPNE7Q9UBL6 633 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 ADGRE2Q9UHX3 823 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 PPT2Q9UMR5 302 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 RUVBL1Q9Y265 456 aaKnown RBP10.97□□□□□ -0.65
SMAD4-205ENST00000588745 NDUFAF1Q9Y375 327 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 TECTAO75443 2155 aa10.97□□□□□ -0.65
SMAD4-205ENST00000588745 TNRC6BQ9UPQ9 1833 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms