RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 STX1BP61266 288 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 RPL38P63173 70 aaKnown RBP25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 DDX39BQ13838 428 aaKnown RBP25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 PLCL1Q15111 1095 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 KIF19Q2TAC6 998 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 BMP8AQ7Z5Y6 402 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 SLC9B2Q86UD5 537 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 SDR16C5Q8N3Y7 309 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 OR9I1Q8NGQ6 314 aa25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 ZC3H10Q96K80 434 aaKnown RBP25.04■■□□□ 1.6
SCAMP4-210ENST00000588555 LOC100653049A0A140TA62 436 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 MAGEB17A8MXT2 336 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 H7BY64 318 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 KRT34O76011 436 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 PCNAP12004 261 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 GNSP15586 552 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 REEP5Q00765 189 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 ACTN3Q08043 901 aaPredicted RBP25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 HIST2H2ACQ16777 129 aaPredicted RBP25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 HIST2H2AA3Q6FI13 130 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 PAOXQ6QHF9 649 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 TMIGD1Q6UXZ0 262 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 MIER2Q8N344 545 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 OR2L3Q8NG85 312 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 RP9Q8TA86 221 aaKnown RBP25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 FLVCR1-AS1Q8TAF5 88 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 PRAP1Q96NZ9 151 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 ASIC5Q9NY37 505 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 NOP53Q9NZM5 478 aaKnown RBP25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 WDFY4Q6ZS81 3184 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 SEC22BO75396 215 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 RASSF2P50749 326 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 CSNK1G2P78368 415 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 ABATP80404 500 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 HHEXQ03014 270 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 GRIK2Q13002 908 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 IL23RQ5VWK5 629 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 SNX32Q86XE0 403 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 FUNDC1Q8IVP5 155 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 RBM12BQ8IXT5 1001 aaKnown RBP25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 KRT78Q8N1N4 520 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 FBXO27Q8NI29 283 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 UBE2E3Q969T4 207 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 CMTM7Q96FZ5 175 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 SLC6A20Q9NP91 592 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 UCKL1Q9NWZ5 548 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 SNX11Q9Y5W9 270 aa25.03■■□□□ 1.6
SCAMP4-210ENST00000588555 FOXE1O00358 373 aaPredicted RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 SDC3O75056 442 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 ETHE1O95571 254 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 THRAP10827 490 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 PTPN4P29074 926 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 MAD2L1Q13257 205 aaPredicted RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 PDCD4Q53EL6 469 aaKnown RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 AGKQ53H12 422 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 RINLQ6ZS11 566 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 GK5Q6ZS86 529 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 TMEM26Q6ZUK4 368 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 VN1R5Q7Z5H4 357 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 C17orf82Q86X59 251 aaPredicted RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 FAM20CQ8IXL6 584 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 KLHL29Q96CT2 875 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 AIF1LQ9BQI0 150 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 MRPS30Q9NP92 439 aaKnown RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 DMRT3Q9NQL9 472 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 CCDC167Q9P0B6 97 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 VPS29Q9UBQ0 182 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 SUSD2Q9UGT4 822 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 POLR3HQ9Y535 204 aaPredicted RBP25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 TMEM131Q92545 1883 aa25.02■■□□□ 1.6
SCAMP4-210ENST00000588555 FAM221BA6H8Z2 402 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 NOBOXO60393 691 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 DNAJC8O75937 253 aaPredicted RBP25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 CXCR2P25025 360 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 PIK3CBP42338 1070 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 NME5P56597 212 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 KIR2DS3Q14952 304 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 ZNF528Q3MIS6 628 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 PEAR1Q5VY43 1037 aaPredicted RBP25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 APIPQ96GX9 242 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 PITHD1Q9GZP4 211 aaPredicted RBP25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 NT5DC2Q9H857 520 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 TAS2R1Q9NYW7 299 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 DOLKQ9UPQ8 538 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 RRP15Q9Y3B9 282 aaKnown RBP25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 DMDP11532 3685 aa25.01■■□□□ 1.59
SCAMP4-210ENST00000588555 ISM1B1AKI9 464 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 G6PDP11413 515 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 CNR2P34972 360 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 FASLGP48023 281 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 MAZP56270 477 aaKnown RBP25■■□□□ 1.59
SCAMP4-210ENST00000588555 RPS13P62277 151 aaKnown RBP25■■□□□ 1.59
SCAMP4-210ENST00000588555 CYLC2Q14093 348 aaPredicted RBP25■■□□□ 1.59
SCAMP4-210ENST00000588555 SF1Q15637 639 aaKnown RBP25■■□□□ 1.59
SCAMP4-210ENST00000588555 ANKRD53Q8N9V6 530 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 C11orf24Q96F05 449 aaPredicted RBP25■■□□□ 1.59
SCAMP4-210ENST00000588555 SLC45A3Q96JT2 553 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 TEX37Q96LM6 180 aa25■■□□□ 1.59
SCAMP4-210ENST00000588555 RHBGQ9H310 441 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms