RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FAM83EQ2M2I3 478 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 TLDC1Q6P9B6 456 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 ZNF517Q6ZMY9 492 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 TIFABQ6ZNK6 161 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 THOC6Q86W42 341 aaKnown RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 DSELQ8IZU8 1212 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 ZNF655Q8N720 491 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 PDPRQ8NCN5 879 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 RHEBL1Q8TAI7 183 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 OR2A5Q96R48 311 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 TMEM79Q9BSE2 394 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 CPNE5Q9HCH3 593 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 LHX9Q9NQ69 397 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 STARD5Q9NSY2 213 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 ZNF358Q9NW07 568 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 PTBP2Q9UKA9 531 aaKnown RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 PADI1Q9ULC6 663 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 SLC22A14Q9Y267 594 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 AP1M2Q9Y6Q5 423 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 FITM1A5D6W6 292 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 KERAO60938 352 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 F8A1P23610 371 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 GDF5P43026 501 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 GLRBP48167 497 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 ACAP2Q15057 778 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 COL28A1Q2UY09 1125 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 FBXO48Q5FWF7 155 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 TCTE1Q5JU00 501 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 WASHC2DQ5SRD0 308 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 LGSNQ5TDP6 509 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 ZNF385CQ66K41 422 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-207ENST00000588542 LCN10Q6JVE6 187 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 FAM199XQ6PEV8 388 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-207ENST00000588542 ADCK2Q7Z695 626 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 PLD3Q8IV08 490 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 ABHD11Q8NFV4 315 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 MZB1Q8WU39 189 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 NEIL2Q969S2 332 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 MTBPQ96DY7 904 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 CLIP3Q96DZ5 547 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 CCDC77Q9BR77 488 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 CD274Q9NZQ7 290 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 PSMC3IPQ9P2W1 217 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-207ENST00000588542 RAB21Q9UL25 225 aa19.33■□□□□ 0.68
DDX39A-207ENST00000588542 H0YGG7 62 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 UBXN8O00124 270 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 MEN1O00255 615 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 CCNYL3P0C7X3 344 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 MTHFD2P13995 350 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 UCNP55089 124 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 TMPRSS3P57727 454 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 ARF3P61204 181 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-207ENST00000588542 SULT1C3Q6IMI6 304 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 RHBDD2Q6NTF9 364 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 EMBQ6PCB8 327 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 TCAIMQ8N3R3 496 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 OR4K1Q8NGD4 311 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 CT55Q8WUE5 264 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 EXT2Q93063 718 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 CAVIN3Q969G5 261 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 ESAMQ96AP7 390 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 IRAK4Q9NWZ3 460 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 NUDT4Q9NZJ9 180 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 CROTQ9UKG9 612 aa19.32■□□□□ 0.68
DDX39A-207ENST00000588542 CCDC189A1A4V9 331 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 K7ENP7 123 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 WDR47O94967 919 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 HBQ1P09105 142 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 COL6A2P12110 1019 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 PRTGQ2VWP7 1150 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 TECRLQ5HYJ1 363 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 CATSPEREQ5SY80 951 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 INO80CQ6PI98 192 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-207ENST00000588542 CCDC81Q6ZN84 652 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 TDRPQ86YL5 185 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 SLC5A11Q8WWX8 675 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 TSNARE1Q96NA8 513 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 CHST8Q9H2A9 424 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 PRORYQ9H606 182 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 WWOXQ9NZC7 414 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 DHCR7Q9UBM7 475 aaKnown RBP19.31■□□□□ 0.68
DDX39A-207ENST00000588542 TBK1Q9UHD2 729 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 IL17BQ9UHF5 180 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 SRPK3Q9UPE1 567 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 ASB1Q9Y576 335 aa19.31■□□□□ 0.68
DDX39A-207ENST00000588542 KCNE1BA0A087WTH5 132 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 IQANK1A0A1B0GTG1 560 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 FEZF1A0PJY2 475 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SUPT3HB4E1H0 165 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 LCMT2O60294 686 aaKnown RBP19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SUPT3HO75486 399 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 MED26O95402 600 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 EIF2S1P05198 315 aaKnown RBP19.3■□□□□ 0.68
DDX39A-207ENST00000588542 CAPN1P07384 714 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 TCN2P20062 427 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 DLSTP36957 453 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 HSPA7P48741 367 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 CCR8P51685 355 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 VAC14Q08AM6 782 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 GRM7Q14831 915 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms