RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 HPCAL1P37235 193 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 WASP42768 502 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 KIR2DL1P43626 348 aaPredicted RBP10.88□□□□□ -0.67
LIG3-204ENST00000585740 OR4D2P58180 307 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 MTPNP58546 118 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 DMPKQ09013 629 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ABHD18Q0P651 414 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 SGCGQ13326 291 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 NFE2L1Q14494 772 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PDK3Q15120 406 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 CYP2A13Q16696 494 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PPP4R4Q6NUP7 873 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 NXPE4Q6UWF7 544 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ZBTB49Q6ZSB9 765 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ST13P4Q8IZP2 240 aaPredicted RBP10.88□□□□□ -0.67
LIG3-204ENST00000585740 KRT78Q8N1N4 520 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PLA2G15Q8NCC3 412 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 VPS37AQ8NEZ2 397 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ST13P5Q8NFI4 369 aaPredicted RBP10.88□□□□□ -0.67
LIG3-204ENST00000585740 OR2T12Q8NG77 320 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 OR7G3Q8NG95 312 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 OR8J2Q8NGG1 315 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 CHTF18Q8WVB6 975 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ASB12Q8WXK4 309 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 FAM131CQ96AQ9 280 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 BIRC7Q96CA5 298 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ZNF597Q96LX8 424 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ZNF583Q96ND8 569 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 CPPED1Q9BRF8 314 aaPredicted RBP10.88□□□□□ -0.67
LIG3-204ENST00000585740 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 THUMPD3Q9BV44 507 aaKnown RBP10.88□□□□□ -0.67
LIG3-204ENST00000585740 WDR26Q9H7D7 661 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PELI2Q9HAT8 420 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PREBQ9HCU5 417 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PRM3Q9NNZ6 103 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 AGPAT4Q9NRZ5 378 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 ASF1AQ9Y294 204 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 TMEM98Q9Y2Y6 226 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 AP4B1Q9Y6B7 739 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 ELOVL7A1L3X0 281 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 K7EQS6 105 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PLRG1O43660 514 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 LDLRP01130 860 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 UBTFL6P0CB48 400 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 ERGP11308 486 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 NPPBP16860 134 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 ZNF26P17031 533 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 PPIBP23284 216 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 HRH2P25021 359 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 CXCR2P25025 360 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TIA1P31483 386 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIG3-204ENST00000585740 PIK3CBP42338 1070 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 CHN2P52757 468 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TAP2Q03519 686 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PRKCQQ04759 706 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 CHRNB3Q05901 458 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 HTR4Q13639 388 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 DDX39BQ13838 428 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 SELPLGQ14242 412 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 SLBPQ14493 270 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIG3-204ENST00000585740 IRF4Q15306 451 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 ATP6AP1Q15904 470 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 DUOXA1Q1HG43 343 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PGS1Q32NB8 556 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PLA2G4EQ3MJ16 856 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 FAM98BQ52LJ0 330 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 SLC44A4Q53GD3 710 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PRAMEF14Q5SWL7 426 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 ANXA8L1Q5VT79 327 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 METRNLQ641Q3 311 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 GALNT18Q6P9A2 607 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 DOK6Q6PKX4 331 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 XKR5Q6UX68 686 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 AMIGO2Q86SJ2 522 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 RALGPS2Q86X27 583 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 LRRC56Q8IYG6 542 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 MICU2Q8IYU8 434 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 GALNT4Q8N4A0 578 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 ZNF548Q8NEK5 533 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 CLHC1Q8NHS4 586 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 HUS1BQ8NHY5 278 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 GANCQ8TET4 914 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TFGQ92734 400 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 NEIL2Q969S2 332 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 FAM120BQ96EK7 910 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 MTERF1Q99551 399 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 SPATA9Q9BWV2 254 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 C1QTNF2Q9BXJ5 285 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 PITHD1Q9GZP4 211 aaPredicted RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 SEMA6AQ9H2E6 1030 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TRIT1Q9H3H1 467 aaKnown RBP10.87□□□□□ -0.67
LIG3-204ENST00000585740 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms