RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ACAT2Q9BWD1 397 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 PARD6BQ9BYG5 372 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 PITHD1Q9GZP4 211 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 NUDT4Q9NZJ9 180 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 TMCO1Q9UM00 188 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 DYRK1BQ9Y463 629 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 KCNE2Q9Y6J6 123 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 HEATR5BQ9P2D3 2071 aa13.23□□□□□ -0.29
PRKCSH-202ENST00000585540 EXOC1LA0A1B0GW35 172 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 TK2O00142 265 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 DSCR3O14972 297 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 PHGDHO43175 533 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 KERAO60938 352 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 S100BP04271 92 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 TUBBP07437 444 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 SFTPCP11686 197 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 COL6A2P12110 1019 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 CXCR2P25025 360 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 PTPN4P29074 926 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 GGT5P36269 586 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 DCDP81605 110 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 CSHL1Q14406 222 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 ACAP2Q15057 778 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 DEFB110Q30KQ9 67 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 ARHGAP40Q5TG30 622 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 ADCK2Q7Z695 626 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 VASH2Q86V25 355 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 GPSM1Q86YR5 675 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 TSNARE1Q96NA8 513 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 GBP5Q96PP8 586 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 CUTCQ9NTM9 273 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 NDOR1Q9UHB4 597 aa13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 FARSAQ9Y285 508 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-202ENST00000585540 IGKV1-8A0A0C4DH67 115 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 A0A0J9YVX5 310 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 HMX2A2RU54 273 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CDC7O00311 574 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 PCDH17O14917 1159 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CTSVO60911 334 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CREG1O75629 220 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 GUCA1CO95843 209 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 IGHEP01854 428 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 NPPBP16860 134 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 GCAP28676 217 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 TYK2P29597 1187 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 HPDP32754 393 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 GMPRP36959 345 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 MAGEA12P43365 314 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CCR8P51685 355 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 SKP1P63208 163 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CDC20Q12834 499 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 FAM53BQ14153 422 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 NCF4Q15080 339 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 PRTGQ2VWP7 1150 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 WASHC2DQ5SRD0 308 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 MROH9Q5TGP6 573 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 LRRC70Q7Z2Q7 622 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CAMKVQ8NCB2 501 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 TTLQ8NG68 377 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 OR4K1Q8NGD4 311 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CT55Q8WUE5 264 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 SLC5A11Q8WWX8 675 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 RHBDF1Q96CC6 855 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 OR2A5Q96R48 311 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 ATG10Q9H0Y0 220 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 CHST8Q9H2A9 424 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 SLC26A1Q9H2B4 701 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 EHD1Q9H4M9 534 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 IKZF3Q9UKT9 509 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 RAB21Q9UL25 225 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 RNF112Q9ULX5 631 aa13.21□□□□□ -0.29
PRKCSH-202ENST00000585540 A0A096LPK6 155 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 IQANK1A0A1B0GTG1 560 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 URADA6NGE7 173 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 KLHL2O95198 593 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SHBGP04278 402 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 C2P06681 752 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 CYC1P08574 325 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SNRPAP09012 282 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC35G6P0C7Q6 338 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 GNAZP19086 355 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms