RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 POU6F1Q14863 301 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 PRTGQ2VWP7 1150 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 MINDY4Q4G0A6 757 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 SLC25A25Q6KCM7 469 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 CSNK1A1LQ8N752 337 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 OR2L3Q8NG85 312 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 ZFYVE21Q9BQ24 234 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 GPATCH1Q9BRR8 931 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 VN1R1Q9GZP7 353 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 TSR3Q9UJK0 312 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 RUVBL2Q9Y230 463 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FN1P02751 2386 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FAM237BA0A1B0GVD1 139 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 MACROD2A1Z1Q3 448 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 H7C0S8 307 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 PROM1O43490 865 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FOXS1O43638 330 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 SPOPO43791 374 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 NEURL1O76050 574 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 SERPINC1P01008 464 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FOSL1P15407 271 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 DNASE1P24855 282 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 SLC26A3P40879 764 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 MEOX1P50221 254 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 DGKQP52824 942 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 SNRPNP63162 240 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ITIH4Q14624 930 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 MEP1AQ16819 746 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ZNF468Q5VIY5 522 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 LRRC38Q5VT99 294 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 PLAG1Q6DJT9 500 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FBXO42Q6P3S6 717 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 LRRC8BQ6P9F7 803 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 CPEB2Q7Z5Q1 589 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 ZZZ3Q8IYH5 903 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 RND1Q92730 232 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 SEC16BQ96JE7 1060 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 AAR2Q9Y312 384 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 NFS1Q9Y697 457 aa13.34□□□□□ -0.27
CSNK1D-224ENST00000584672 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 OR2A25A4D2G3 310 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 HACD1B0YJ81 288 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 TFECO14948 347 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 SLC25A12O75746 678 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 TMEM253P0C7T8 217 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 FOXN2P32314 431 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 ZBED6P86452 979 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 NR1I3Q14994 352 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 TMEM211Q6ICI0 200 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 H3F3CQ6NXT2 135 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 UNC5DQ6UXZ4 953 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 PRIMA1Q86XR5 153 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 WFDC11Q8NEX6 87 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 OR2A1Q8NGT9 310 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 SKA2Q8WVK7 121 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 RMND5BQ96G75 393 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 CYTH2Q99418 400 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 DRC3Q9H069 523 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 RTTNQ86VV8 2226 aa13.33□□□□□ -0.28
CSNK1D-224ENST00000584672 A0A1W2PPV9 198 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 CCDC162PA2VCL2 907 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 P2RX6O15547 441 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 CTAG2O75638 210 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 PDE9AO76083 593 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 SUN1O94901 812 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 FKBP9O95302 570 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 COMTP21964 271 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 ADSLP30566 484 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 MARCKSL1P49006 195 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 NR0B1P51843 470 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 NUP107P57740 925 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 PMPCAQ10713 525 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 TSTA3Q13630 321 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 CCDC38Q502W7 563 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 TTC23LQ6PF05 361 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 ANKRD37Q7Z713 158 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 ALS2CR12Q96Q35 445 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 RAB11FIP5Q9BXF6 653 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 CDCP1Q9H5V8 836 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 HCN3Q9P1Z3 774 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 C19orf25Q9UFG5 118 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms