RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ZSWIM8A7E2V4 1837 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 SCN4AP35499 1836 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 CACNA1IQ9P0X4 2223 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 J3QRK9 145 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 C8orf89P0DMQ9 161 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 PRPS2P11908 318 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 C6P13671 934 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-217ENST00000584582 PPIGQ13427 754 aaKnown RBP eCLIP10.94□□□□□ -0.664e-7■■■■□ 22.4
TOP3A-217ENST00000584582 LCN8Q6JVE9 175 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 AMZ2Q86W34 360 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 TICAM1Q8IUC6 712 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 FAM9CQ8IZT9 166 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 CSGALNACT1Q8TDX6 532 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 BTN2A2Q8WVV5 523 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 ZUFSPQ96AP4 578 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 FBXL8Q96CD0 374 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF641Q96N77 438 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-217ENST00000584582 KCNC2Q96PR1 638 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 BBS4Q96RK4 519 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 PKP4Q99569 1192 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 ZBP1Q9H171 429 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 TM7SF3Q9NS93 570 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 PCDHA9Q9Y5H5 950 aa10.94□□□□□ -0.66
TOP3A-217ENST00000584582 A0A1W2PP55 124 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ASPDHA6ND91 283 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 FADS2P1A8MWK0 482 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 M0QX08 132 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 M0R129 80 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 DENRO43583 198 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ANGPTL1O95841 491 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 AGXTP21549 392 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SSR2P43308 183 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 B4GALNT1Q00973 533 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ADRM1Q16186 407 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 BROXQ5VW32 411 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 R3HCC1LQ7Z5L2 792 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 TMCO5AQ8N6Q1 288 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 OR5AR1Q8NGP9 310 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 NXPE3Q969Y0 559 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 TRMT61BQ9BVS5 477 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 NAA50Q9GZZ1 169 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 RIMKLBQ9ULI2 386 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 OR51B4Q9Y5P0 310 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 HEPACAM2A8MVW5 462 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 FZD6O60353 706 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 EFCAB14O75071 495 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 C1QCP02747 245 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ETFAP13804 333 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF182P17025 639 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PRPS1L1P21108 318 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 AOAHP28039 575 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PCSK6P29122 969 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ATP6V1E1P36543 226 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SLC7A9P82251 487 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 LIPIQ6XZB0 460 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 DSG4Q86SJ6 1040 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 APLFQ8IW19 511 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 GLB1L3Q8NCI6 653 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 FAM81AQ8TBF8 368 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SGCDQ92629 289 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ALG14Q96F25 216 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF583Q96ND8 569 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 DNAJB9Q9UBS3 223 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 FBXW2Q9UKT8 454 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 RUVBL1Q9Y265 456 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 NME6O75414 186 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 NFATC1O95644 943 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PABPC4LP0CB38 370 aaKnown RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 UMPSP11172 480 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF8P17098 575 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 IGFBP4P22692 258 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 JAK1P23458 1154 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 HRH2P25021 359 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PSMB5P28074 263 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 MAPK12P53778 367 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ITGADQ13349 1161 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PYCR3Q53H96 274 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ANKRD33Q7Z3H0 272 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PDPRQ8NCN5 879 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 OR7G3Q8NG95 312 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 B4GALNT2Q8NHY0 566 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 ASB11Q8WXH4 323 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 HHIPL1Q96JK4 782 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 DACH2Q96NX9 599 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 SLC12A9Q9BXP2 914 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 IL23AQ9NPF7 189 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PAK6Q9NQU5 681 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 PRDM8Q9NQV8 689 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 STOX2Q9P2F5 926 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-217ENST00000584582 DUSP12Q9UNI6 340 aa10.93□□□□□ -0.66
TOP3A-217ENST00000584582 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms