RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	TMEM68	Q96MH6	324 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF570	Q96NI8	536 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	CASD1	Q96PB1	797 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	GCNA	Q96QF7	691 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	BPIFA3	Q9BQP9	254 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	KIFC3	Q9BVG8	833 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	MRPL1	Q9BYD6	325 aa	Known RBP	3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	EDEM3	Q9BZQ6	932 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	TRIM6	Q9C030	488 aa	Predicted RBP	3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	PLK3	Q9H4B4	646 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	BPIFA1	Q9NP55	256 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.08	□□□□□ -1.92	2e-6	■■■■□ 20.1
MSI2-215	ENST00000582453	SLC38A7	Q9NVC3	462 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	SMARCAL1	Q9NZC9	954 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	RWDD2A	Q9UIY3	292 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	MAN1B1	Q9UKM7	699 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	UBQLN1	Q9UMX0	589 aa	Known RBP	3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	GINS2	Q9Y248	185 aa		3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	PTRH2	Q9Y3E5	179 aa	Known RBP	3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNFX1	Q9P2E3	1918 aa	Known RBP	3.08	□□□□□ -1.92
MSI2-215	ENST00000582453	LTBP2	Q14767	1821 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TANC1	Q9C0D5	1861 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MCM3AP	O60318	1980 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SMIM28	A0A1B0GU29	152 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ARHGEF37	A1IGU5	675 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ARL5C	A6NH57	179 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF233	A6NK53	670 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453		A8MV72	311 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ANKRD63	C9JTQ0	380 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	PTGES	O14684	152 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CETN3	O15182	167 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	HS6ST1	O60243	411 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	STX10	O60499	249 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MITF	O75030	526 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	NDUFS7	O75251	213 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CSDE1	O75534	798 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SLC25A12	O75746	678 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TPPP	O94811	219 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	FGFR1OP	O95684	399 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	FTCD	O95954	541 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	NR3C1	P04150	777 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	KRT10	P13645	584 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	IL7R	P16871	459 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF182	P17025	639 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	DDX5	P17844	614 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	NR2F2	P24468	414 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CASP1	P29466	404 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	PRCP	P42785	496 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MRPS5	P82675	430 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	FKBP3	Q00688	224 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ELAVL2	Q12926	359 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	BTG3	Q14201	252 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	OASL	Q15646	514 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SNRNP35	Q16560	246 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	STX1A	Q16623	288 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MMEL1	Q495T6	779 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ATP13A5	Q4VNC0	1218 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	RARS2	Q5T160	578 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	WBP2NL	Q6ICG8	309 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ARMCX5	Q6P1M9	558 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	DCLRE1A	Q6PJP8	1040 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MTSS1L	Q765P7	747 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SYCP3	Q8IZU3	236 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MINDY1	Q8N5J2	469 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	LRRC52	Q8N7C0	313 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	HUS1B	Q8NHY5	278 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TRPC4AP	Q8TEL6	797 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TAF4B	Q92750	862 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	IGSF8	Q969P0	613 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SAT2	Q96F10	170 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	PGAP3	Q96FM1	320 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CPB2	Q96IY4	423 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CNDP2	Q96KP4	475 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	LMLN	Q96KR4	655 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF558	Q96NG5	402 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TGS1	Q96RS0	853 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TSG101	Q99816	390 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CBWD1	Q9BRT8	395 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TCHP	Q9BT92	498 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	FGFBP2	Q9BYJ0	223 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	KRTAP2-2	Q9BYT5	123 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	NXF3	Q9H4D5	531 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ESRP2	Q9H6T0	727 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CWH43	Q9H720	699 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	RPF1	Q9H9Y2	349 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	TBC1D13	Q9NVG8	400 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ANO10	Q9NW15	660 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ANAPC2	Q9UJX6	822 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	ITGA11	Q9UKX5	1188 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	EXO1	Q9UQ84	846 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CCL27	Q9Y4X3	112 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	SNX9	Q9Y5X1	595 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	CEPT1	Q9Y6K0	416 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	STON1	Q9Y6Q2	735 aa		3.07	□□□□□ -1.92
MSI2-215	ENST00000582453	LOC102723996	A0A087X1L8	192 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SAA2-SAA4	A0A096LPE2	208 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	FAM170A	A1A519	330 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	GTPBP10	A4D1E9	387 aa	Known RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TMEM202	A6NGA9	273 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms