RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GPR33Q49SQ1 333 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 SPOUT1Q5T280 376 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 LCN1P1Q5VSP4 162 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 UGT3A1Q6NUS8 523 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 BTNL8Q6UX41 500 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 GBP6Q6ZN66 633 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 C15orf39Q6ZRI6 1047 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD33Q7Z3H0 272 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 C4orf19Q8IY42 314 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 KIRREL3Q8IZU9 778 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 TMCO5AQ8N6Q1 288 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 CNBD1Q8NA66 436 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 TRIM58Q8NG06 486 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 SEPT1Q8WYJ6 367 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 P2RX5Q93086 422 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 GIMAP5Q96F15 307 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 GDAP1L1Q96MZ0 367 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 NDNQ99608 321 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 MAP3K3Q99759 626 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 PHPT1Q9NRX4 125 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 INTS10Q9NVR2 710 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 CDH7Q9ULB5 785 aa4.19□□□□□ -1.74
SMCHD1-205ENST00000581383 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SERINC4A6NH21 518 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 YDJCA8MPS7 323 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 C17orf105B2RV13 164 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 PRSS46E5RG02 174 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 FPGTO14772 594 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SLC30A4O14863 429 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 EPHB6O15197 1021 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 GLRA3O75311 464 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 NADKO95544 446 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 BAG3O95817 575 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM157CP0CG43 387 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CHRNB4P30926 498 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 LBX1P52954 281 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SP3Q02447 781 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 OPCMLQ14982 345 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SLMAPQ14BN4 828 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD20A4Q4UJ75 823 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD20A8PQ5CZ79 823 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 XKR6Q5GH73 641 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CCDC158Q5M9N0 1113 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD20A2Q5SQ80 823 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD20A1Q5TYW2 823 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 ANKRD20A3Q5VUR7 823 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM53AQ6NSI3 398 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CASC4Q6P4E1 433 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 G2E3Q7L622 706 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 PIGWQ7Z7B1 504 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 PHLDB2Q86SQ0 1253 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CROCCP3Q8IVE0 287 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 TUSC5Q8IXB3 177 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CCDC170Q8IYT3 715 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 OR7A2PQ8NGA2 310 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 OR2T11Q8NH01 316 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CTCFLQ8NI51 663 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 C4orf45Q96LM5 186 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 AK8Q96MA6 479 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 UTP14AQ9BVJ6 771 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 CDK19Q9BWU1 502 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 MTMR12Q9C0I1 747 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM49AQ9H0Q0 323 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SDCBP2Q9H190 292 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 MMADHCQ9H3L0 296 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 TMEM206Q9H813 350 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 PPANQ9NQ55 473 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 VPS18Q9P253 973 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 C19orf25Q9UFG5 118 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 RUVBL2Q9Y230 463 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 TCF19Q9Y242 345 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 MYH14Q7Z406 1995 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 IGSF1Q8N6C5 1336 aa4.18□□□□□ -1.74
SMCHD1-205ENST00000581383 SNURFLB1AK76 121 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 F8VVB4 439 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 F8VWA3 439 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 O00370 1275 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 EXTL3O43909 919 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 CDC123O75794 336 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 CDK2AP2O75956 126 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 EML2O95834 649 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 C9P02748 559 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 AMBPP02760 352 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 PATE4P0C8F1 98 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 GP1BBP13224 206 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 F3P13726 295 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 ANOS1P23352 680 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SSTR1P30872 391 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SFTPDP35247 375 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 CETN2P41208 172 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 MAGEA11P43364 429 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 FOLH1Q04609 750 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 RBM39Q14498 530 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 PDLIM3Q53GG5 364 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 FFAR4Q5NUL3 377 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 TTC27Q6P3X3 843 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 FUT10Q6P4F1 479 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 TMEM207Q6UWW9 146 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SYCP3Q8IZU3 236 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 DBF4BQ8NFT6 615 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms