RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MT-CO3P00414 261 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 THRAP10827 490 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CDH1P12830 882 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 JUPP14923 745 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 EZRP15311 586 aaKnown RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 PSMB5P28074 263 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CCKBRP32239 447 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CSF2RBP32927 897 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CDH13P55290 713 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 GFERP55789 205 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 RPS15AP62244 130 aaKnown RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 PHEXP78562 749 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 INSM1Q01101 510 aaPredicted RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 ACY1Q03154 408 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 CHIT1Q13231 466 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 RCN2Q14257 317 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 PUM1Q14671 1186 aaKnown RBP eCLIP13.73□□□□□ -0.21
SKA2-205ENST00000580541 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 FRMD7Q6ZUT3 714 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 GPRIN3Q6ZVF9 776 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 ARHGAP22Q7Z5H3 698 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 TMPRSS11BQ86T26 416 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 SLCO6A1Q86UG4 719 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 ZNF655Q8N720 491 aaPredicted RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 C19orf47Q8N9M1 422 aaKnown RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 AGBL5Q8NDL9 886 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 OR4K1Q8NGD4 311 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 LRRC8CQ8TDW0 803 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 TRPC4APQ8TEL6 797 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 WDR34Q96EX3 536 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 ZNF382Q96SR6 550 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 NRTNQ99748 197 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CMKLR1Q99788 373 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 NT5DC2Q9H857 520 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 FANCEQ9HB96 536 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 PRM3Q9NNZ6 103 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 PFDN4Q9NQP4 134 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 THAP1Q9NVV9 213 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CLCA2Q9UQC9 943 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 PCDHGA11Q9Y5H2 935 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 CNOT1A5YKK6 2376 aaKnown RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 IGHV5-51A0A0C4DH38 117 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 LRRC14BA6NHZ5 514 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 KLF11O14901 512 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 WFS1O76024 890 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 ESRRBO95718 433 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 HSPA4LO95757 839 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 CHEK2O96017 543 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 ENO1P06733 434 aaKnown RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 FGF3P11487 239 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 HGFP14210 728 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 NELFEP18615 380 aaKnown RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 MAGP20916 626 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 SERPINB1P30740 379 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 MLLT3P42568 568 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 ATP1A2P50993 1020 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 EIF3IQ13347 325 aaKnown RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 TUBB8Q3ZCM7 444 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 TTC19Q6DKK2 380 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 ZNF425Q6IV72 752 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 ZNF574Q6ZN55 896 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 MYLK4Q86YV6 388 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 SLITRK4Q8IW52 837 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 OR8K5Q8NH50 307 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 RERGQ96A58 199 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 SLC41A2Q96JW4 573 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 CCDC74BQ96LY2 380 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
SKA2-205ENST00000580541 GSTO2Q9H4Y5 243 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 MID1IP1Q9NPA3 183 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 BTRCQ9Y297 605 aa13.72□□□□□ -0.21
SKA2-205ENST00000580541 PIEZO1Q92508 2521 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 KCNE1BA0A087WTH5 132 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 TRBC2A0A5B9 178 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 OR2A25A4D2G3 310 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ANKDD1BA6NHY2 528 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 E7EQ34 232 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 OR7A17O14581 309 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.21
SKA2-205ENST00000580541 KRT6AP02538 564 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 KRT6BP04259 564 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 MSL3P1P0C860 447 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ST6GAL1P15907 406 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 BGNP21810 368 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 MPSTP25325 297 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 AHRP35869 848 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 SLC1A6P48664 564 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 KRT6CP48668 564 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 SEPHS1P49903 392 aa13.71□□□□□ -0.21
SKA2-205ENST00000580541 ABCE1P61221 599 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms