RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SEMA6AQ9H2E6 1030 aa19.57■□□□□ 0.72
SMG8-203ENST00000578922 PNPLA3Q9NST1 481 aa19.57■□□□□ 0.72
SMG8-203ENST00000578922 KCNE1BA0A087WTH5 132 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 KRT6AP02538 564 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 KRT6BP04259 564 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ZNF23P17027 643 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 KRT6CP48668 564 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ERVK-8P63133 956 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ZP2Q05996 745 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 BNIP2Q12982 314 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 DOC2AQ14183 400 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 PUS10Q3MIT2 529 aaKnown RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 RFTN2Q52LD8 501 aaPredicted RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 OGFOD2Q6N063 350 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 GCNT7Q6ZNI0 430 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ARHGAP22Q7Z5H3 698 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 SPATA19Q7Z5L4 167 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 RGL4Q8IZJ4 473 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 TSPEARQ8WU66 669 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 C12orf66Q96MD2 445 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 PRM3Q9NNZ6 103 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 IMP3Q9NV31 184 aaKnown RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 SH2B3Q9UQQ2 575 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 MRPS17Q9Y2R5 130 aaKnown RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 CCL27Q9Y4X3 112 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 CCDC160A6NGH7 325 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 PDZK1P1A8MUH7 402 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 CHURC1-FNTBB4DL54 471 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 NR5A2O00482 541 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 HSD17B1P14061 328 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 SLC2A4P14672 509 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 IDO1P14902 403 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 VARSP26640 1264 aaKnown RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 AKT2P31751 481 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 RPL38P63173 70 aaKnown RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 TUBA4AP68366 448 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 FOXM1Q08050 763 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 NFATC4Q14934 902 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 MTX3Q5HYI7 312 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 CAPN13Q6MZZ7 669 aaPredicted RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 ERMP1Q7Z2K6 904 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 DCUN1D3Q8IWE4 304 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 L3MBTL4Q8NA19 623 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 DENND6BQ8NEG7 585 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 USP7Q93009 1102 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 NEIL2Q969S2 332 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 RAD51AP1Q96B01 352 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 TEX37Q96LM6 180 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 INSM2Q96T92 566 aaPredicted RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 TIMM29Q9BSF4 260 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ANKRD60Q9BZ19 345 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 RMI1Q9H9A7 625 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 CCM2LQ9NUG4 571 aaPredicted RBP19.56■□□□□ 0.72
SMG8-203ENST00000578922 AIG1Q9NVV5 245 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 GID8Q9NWU2 228 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 ACSL5Q9ULC5 683 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 MYRFQ9Y2G1 1151 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 GPR45Q9Y5Y3 372 aa19.56■□□□□ 0.72
SMG8-203ENST00000578922 OR52A4PA6NMU1 304 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 HNRNPRO43390 633 aaKnown RBP19.55■□□□□ 0.72
SMG8-203ENST00000578922 RGS14O43566 566 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 IGHV4-34P06331 123 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 PNLIPRP1P54315 467 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 TAP2Q03519 686 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 CYP2R1Q6VVX0 501 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 ZBTB49Q6ZSB9 765 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 SYNPOQ8N3V7 929 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 OR5K2Q8NHB8 316 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 FERD3LQ96RJ6 166 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 PRDM8Q9NQV8 689 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 C8orf4Q9NR00 106 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 SDR39U1Q9NRG7 319 aaPredicted RBP19.55■□□□□ 0.72
SMG8-203ENST00000578922 PNMA8BQ9ULN7 279 aaPredicted RBP19.55■□□□□ 0.72
SMG8-203ENST00000578922 SNX6Q9UNH7 406 aa19.55■□□□□ 0.72
SMG8-203ENST00000578922 POLR3HQ9Y535 204 aaPredicted RBP19.55■□□□□ 0.72
SMG8-203ENST00000578922 H3BNH8 94 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 SLC28A1O00337 649 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 KELP23276 732 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 KIAA1024LP59773 190 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 UFM1P61960 85 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 DDX39BQ13838 428 aaKnown RBP19.54■□□□□ 0.72
SMG8-203ENST00000578922 GGTA1PQ4G0N0 100 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 KRT80Q6KB66 452 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 HMBOX1Q6NT76 420 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 LAYNQ6UX15 382 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 TMPRSS11BQ86T26 416 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 SNX19Q92543 992 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 PPWD1Q96BP3 646 aaKnown RBP19.54■□□□□ 0.72
SMG8-203ENST00000578922 ACAT2Q9BWD1 397 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 ACPTQ9BZG2 426 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 MUC13Q9H3R2 512 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 TIMMDC1Q9NPL8 285 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 WNT16Q9UBV4 365 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 INVSQ9Y283 1065 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 GON4LQ3T8J9 2241 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 JUPP14923 745 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 NPPBP16860 134 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 MRPL19P49406 292 aaKnown RBP19.54■□□□□ 0.72
SMG8-203ENST00000578922 DMPKQ09013 629 aa19.54■□□□□ 0.72
SMG8-203ENST00000578922 CLCA4Q14CN2 919 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms