RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SLC16A5O15375 505 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 PRICKLE3O43900 615 aaPredicted RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 LDLRP01130 860 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 HIST1H2AGP0C0S8 130 aaPredicted RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 HIST1H2ADP20671 130 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 SAT1P21673 171 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 FDXRP22570 491 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 FOLR3P41439 243 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 PNLIPRP1P54315 467 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 MYBPC3Q14896 1274 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 NAA25Q14CX7 972 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 DCAF10Q5QP82 559 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 C1orf189Q5VU69 101 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 FAM20CQ8IXL6 584 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 GALNT16Q8N428 558 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 LMNTD1Q8N9Z9 388 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 CLEC1AQ8NC01 280 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 HIST1H2AHQ96KK5 128 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 HIST1H2AJQ99878 128 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 H2AFJQ9BTM1 129 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 SPRTNQ9H040 489 aaPredicted RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 ILKAPQ9H0C8 392 aaPredicted RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 RHOJQ9H4E5 214 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 PLCL2Q9UPR0 1127 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 PSAT1Q9Y617 370 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 FAM95CA0A1B0GW59 222 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 KRT87PA6NCN2 255 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 PABPN1LA6NDY0 278 aaKnown RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 TARM1B6A8C7 271 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 H3BMH7 237 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 KLHL41O60662 606 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 SLC16A8O95907 504 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 IGHEP01854 428 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 CD63P08962 238 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 ERGP11308 486 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 MAGP20916 626 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 CMPK1P30085 196 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 STX2P32856 288 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 RPA3P35244 121 aaPredicted RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 DCTP40126 519 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 SLC12A2P55011 1212 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 GPX6P59796 221 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 DCDP81605 110 aaKnown RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 SP140Q13342 867 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 FASTKQ14296 549 aaKnown RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 ZIC1Q15915 447 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 ZC3H12BQ5HYM0 836 aaKnown RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 RHBDD2Q6NTF9 364 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 IGFL3Q6UXB1 125 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 DNAJC22Q8N4W6 341 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 OR2A1Q8NGT9 310 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 PROKR1Q8TCW9 393 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 IFT81Q8WYA0 676 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 VPS39Q96JC1 886 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 CCDC138Q96M89 665 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 GBP5Q96PP8 586 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 OLFM1Q99784 485 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 CPNE1Q99829 537 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 TRIM54Q9BYV2 358 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 PARVBQ9HBI1 364 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 SMYD2Q9NRG4 433 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 ZDHHC18Q9NUE0 388 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 P4HTMQ9NXG6 502 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 IFT80Q9P2H3 777 aaPredicted RBP15.32■□□□□ 0.04
VAPA-204ENST00000577901 NDOR1Q9UHB4 597 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 SLC5A6Q9Y289 635 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 ESPL1Q14674 2120 aa15.32■□□□□ 0.04
VAPA-204ENST00000577901 CENPEQ02224 2701 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 ITPR2Q14571 2701 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 ANKUB1A6NFN9 424 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 FAM159BA6NKW6 160 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 ENO4A6NNW6 628 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 HCRTR1O43613 425 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 IPO13O94829 963 aaKnown RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 CCNDBP1O95273 360 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 TSTA3Q13630 321 aaPredicted RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 DEFB110Q30KQ9 67 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 FIGLAQ6QHK4 219 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 SUSD1Q6UWL2 747 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 SPNS2Q8IVW8 549 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 CTAGE3PQ8IX95 158 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 OR2L3Q8NG85 312 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 OR2Y1Q8NGV0 311 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 ZNF480Q8WV37 535 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 TM9SF4Q92544 642 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 PDLIM5Q96HC4 596 aaKnown RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 C5orf34Q96MH7 638 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 MIPEPQ99797 713 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 ZNF552Q9H707 407 aaPredicted RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 IRAK4Q9NWZ3 460 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 UTP6Q9NYH9 597 aaKnown RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 KLHL20Q9Y2M5 609 aa15.31■□□□□ 0.04
VAPA-204ENST00000577901 COPG1Q9Y678 874 aaKnown RBP15.31■□□□□ 0.04
VAPA-204ENST00000577901 A0A1W2PPV9 198 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
VAPA-204ENST00000577901 E7ENX8 843 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms