RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	PCDH17	O14917	1159 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	TTI1	O43156	1089 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	HCRTR1	O43613	425 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	PRICKLE3	O43900	615 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CTSV	O60911	334 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	KLF7	O75840	302 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	WFS1	O76024	890 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	S100B	P04271	92 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SERPIND1	P05546	499 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CAPN1	P07384	714 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	F7	P08709	466 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SLC35G6	P0C7Q6	338 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MYBL2	P10244	700 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ACPP	P15309	386 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MMP11	P24347	488 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MAGEA3	P43357	314 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	EMP2	P54851	167 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MLLT10	P55197	1068 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	AP1S2	P56377	157 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	RPS15A	P62244	130 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	TBPL1	P62380	186 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	TAP2	Q03519	686 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CKAP4	Q07065	602 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MGAT5	Q09328	741 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	NAE1	Q13564	534 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	GBX1	Q14549	363 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MYBPC3	Q14896	1274 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	NKG7	Q16617	165 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	COLEC12	Q5KU26	742 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	HECTD2	Q5U5R9	776 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FAM69B	Q5VUD6	431 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	AGAP7P	Q5VUJ5	663 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ZNF385C	Q66K41	422 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FRMPD2B	Q6IN97	320 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MRPL14	Q6P1L8	145 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ZNF549	Q6P9A3	640 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	AGTRAP	Q6RW13	159 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	PAQR3	Q6TCH7	311 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SHISA6	Q6ZSJ9	500 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	RNF44	Q7L0R7	432 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	STRA8	Q7Z7C7	330 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	PAQR7	Q86WK9	346 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CREG2	Q8IUH2	290 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ANKMY2	Q8IV38	441 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ZBED8	Q8IZ13	594 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	IQCK	Q8N0W5	287 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	OR4N4	Q8N0Y3	316 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	NKAP	Q8N5F7	415 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CAMKV	Q8NCB2	501 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FBXO36	Q8NEA4	188 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FDCSP	Q8NFU4	85 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CPT1C	Q8TCG5	803 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	STT3B	Q8TCJ2	826 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ADAMTS17	Q8TE56	1095 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ZNF480	Q8WV37	535 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	EEF1AKMT1	Q8WVE0	214 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	TSPAN17	Q96FV3	270 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	PRAP1	Q96NZ9	151 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	AGAP4	Q96P64	663 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SLC30A3	Q99726	388 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	EGFL8	Q99944	293 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	TRIM51	Q9BSJ1	452 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	HAUS8	Q9BT25	410 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MENT	Q9BUN1	341 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	NUDT9	Q9BW91	350 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FAM129A	Q9BZQ8	928 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	DRC3	Q9H069	523 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	RAB17	Q9H0T7	212 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ATG10	Q9H0Y0	220 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	DPH5	Q9H2P9	285 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ANKH	Q9HCJ1	492 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	STOX2	Q9P2F5	926 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	GALP	Q9UBC7	116 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	C3orf18	Q9UK00	162 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	FBXL4	Q9UKA2	621 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	VWA7	Q9Y334	891 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SNX24	Q9Y343	169 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	DYRK1B	Q9Y463	629 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	KLK4	Q9Y5K2	254 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	DMXL2	Q8TDJ6	3036 aa		5.17	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	ASPM	Q8IZT6	3477 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524		A0A0A6YYC8	382 aa	Predicted RBP	5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	NSG1	A0A0A6YYJ2	146 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	DYTN	A2CJ06	578 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	KRT87P	A6NCN2	255 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	URAD	A6NGE7	173 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	USP27X	A6NNY8	438 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524		H3BMH7	237 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524		I3L1I5	382 aa	Predicted RBP	5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	GFY	I3L273	518 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	EIF3H	O15372	352 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	H2AFY	O75367	372 aa	Known RBP	5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	BANF1	O75531	89 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	CEACAM4	O75871	244 aa		5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	SEC31A	O94979	1220 aa	Known RBP	5.16	□□□□□ -1.58
ARHGAP28-208	ENST00000577524	GUCA1C	O95843	209 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms