RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PLLPQ9Y342 182 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 MRPS2Q9Y399 296 aaKnown RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CCDC88CQ9P219 2028 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ERICH4A6NGS2 130 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TCP11X1B4DZS4 312 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 B4E171 279 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SUPT3HB4E1H0 165 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 E7EQ34 232 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 H7BY64 318 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 EIF3FO00303 357 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 FFAR3O14843 346 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 KLF11O14901 512 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 POLR1CO15160 346 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SLC16A5O15375 505 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 GPR42O15529 346 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ZW10O43264 779 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SNX3O60493 162 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SUPT3HO75486 399 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 STK17BO94768 372 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DLGAP3O95886 979 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 B3GALT4O96024 378 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 MTHFD2P13995 350 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 EPORP19235 508 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ITGAXP20702 1163 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 F8A1P23610 371 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 RBMS1P29558 406 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TYK2P29597 1187 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TSPAN7P41732 249 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CCT5P48643 541 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ARL4DP49703 201 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 HNRNPH2P55795 449 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 RPS18P62269 152 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 HSD11B2P80365 405 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CLPPQ16740 277 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 HKDC1Q2TB90 917 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 PTCHD3Q3KNS1 767 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ATP1A1-AS1Q5TC04 95 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 THEMIS2Q5TEJ8 643 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 LRRC8EQ6NSJ5 796 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 FAM199XQ6PEV8 388 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TTC23LQ6PF05 361 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 C19orf48Q6RUI8 117 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 FRA10AC1Q70Z53 315 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 PRSS41Q7RTY9 318 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ADCK2Q7Z695 626 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 YTHDF3Q7Z739 585 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TMPRSS11BQ86T26 416 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TBC1D1Q86TI0 1168 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ISCA2Q86U28 154 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DNAJC22Q8N4W6 341 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 NKAPQ8N5F7 415 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 AMER2Q8N7J2 671 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 OR56A3Q8NH54 315 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 MGARPQ8TDB4 240 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SMPDL3AQ92484 453 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 NEIL2Q969S2 332 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 RHBDF1Q96CC6 855 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 FBXL8Q96CD0 374 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TSPAN17Q96FV3 270 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 PDLIM5Q96HC4 596 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CCDC138Q96M89 665 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 PRAP1Q96NZ9 151 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 TAAR9Q96RI9 348 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CD180Q99467 661 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 EGFL8Q99944 293 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DPYSL5Q9BPU6 564 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DPH7Q9BTV6 452 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SGPP1Q9BX95 441 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 ULBP3Q9BZM4 244 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CPNE5Q9HCH3 593 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 MLXIPLQ9NP71 852 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 MRPS30Q9NP92 439 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 CPSF2Q9P2I0 782 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 XPR1Q9UBH6 696 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 DHCR7Q9UBM7 475 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 LNPEPQ9UIQ6 1025 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 RALYQ9UKM9 306 aaKnown RBP7.58□□□□□ -1.2
CCDC40-215ENST00000576033 EMCNQ9ULC0 261 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 RNF112Q9ULX5 631 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 SLC22A14Q9Y267 594 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 BOD1L1Q8NFC6 3051 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 PTPRQQ9UMZ3 2332 aa7.58□□□□□ -1.2
CCDC40-215ENST00000576033 IGSF10Q6WRI0 2623 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 A0A087X1B8 175 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 LOC101059948A0A1B0GTJ6 334 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 A0A1B0GTL3 188 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 OR2A25A4D2G3 310 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 C4orf51C9J302 202 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 MATN2O00339 956 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 COPEO14579 308 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 TOX3O15405 576 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 KLK10O43240 276 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 RAD1O60671 282 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 EDF1O60869 148 aaKnown RBP7.57□□□□□ -1.2
CCDC40-215ENST00000576033 KERAO60938 352 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SCRG1O75711 98 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 WDR47O94967 919 aa7.57□□□□□ -1.2
CCDC40-215ENST00000576033 SIX3O95343 332 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms