RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SLC22A14Q9Y267 594 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ANKRD11Q6UB99 2663 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SRRM3A6NNA2 597 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CLGNO14967 610 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZNF749O43361 778 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CTSVO60911 334 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SMIM24O75264 130 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 RFPL1O75677 317 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SHBGP04278 402 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 NTRK1P04629 796 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CDH1P12830 882 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 GNAZP19086 355 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 AGXTP21549 392 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CXCR2P25025 360 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SLCO1A2P46721 670 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SLC6A12P48065 614 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 VSX2P58304 361 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CDC16Q13042 620 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CLN3Q13286 438 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 FAM214AQ32MH5 1076 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SPACA3Q8IXA5 215 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 KLHDC8AQ8IYD2 350 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZSCAN1Q8NBB4 408 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 GALNT6Q8NCL4 622 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 NKD1Q969G9 470 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 C17orf62Q9BQA9 187 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 DNAJC11Q9NVH1 559 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 TNPO3Q9Y5L0 923 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 FREM2Q5SZK8 3169 aa12.23□□□□□ -0.45
TRAPPC1-206ENST00000573989 IGKV1-8A0A0C4DH67 115 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 TLDC2A0PJX2 215 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 UBXN8O00124 270 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 MAP2K7O14733 419 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 HAT1O14929 419 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 CCNT2O60583 730 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 TIAF1O95411 115 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 EIF2S1P05198 315 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 GSTA1P08263 222 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZNF28P17035 718 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 GMPRP36959 345 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 HSPA7P48741 367 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 ALDH18A1P54886 795 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 YBX1P67809 324 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 PDK4Q16654 411 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 TECRLQ5HYJ1 363 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 WASHC2DQ5SRD0 308 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 RHBDD2Q6NTF9 364 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 METTL2BQ6P1Q9 378 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 LRRC70Q7Z2Q7 622 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 CROCCP2Q86T23 111 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 PLD6Q8N2A8 252 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 SNX31Q8N9S9 440 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 ABHD11Q8NFV4 315 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 PROKR1Q8TCW9 393 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 EPS8L3Q8TE67 593 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 GPR78Q96P69 363 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 AIF1LQ9BQI0 150 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 MRPL46Q9H2W6 279 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 GPN2Q9H9Y4 310 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 PELI2Q9HAT8 420 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 LHX9Q9NQ69 397 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 CPSF2Q9P2I0 782 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 KCND3Q9UK17 655 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 ANGPTL3Q9Y5C1 460 aa12.22□□□□□ -0.45
TRAPPC1-206ENST00000573989 KCNE1BA0A087WTH5 132 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 FITM1A5D6W6 292 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 H0YGG7 62 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 MEN1O00255 615 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TAPBPO15533 448 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 HCRTR1O43613 425 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 CD63P08962 238 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PYGBP11216 843 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TAC1P20366 129 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 ALAS2P22557 587 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 STAT5AP42229 794 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 GDF5P43026 501 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 KCNC1P48547 511 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 CCT5P48643 541 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PIK3CGP48736 1102 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 EMP3P54852 163 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 CSNK1G2P78368 415 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TGIF1Q15583 401 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms