RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ASB11Q8WXH4 323 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 NACC2Q96BF6 587 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 CNDP1Q96KN2 507 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 EBNA1BP2Q99848 306 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 NAT9Q9BTE0 207 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 DRC3Q9H069 523 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 KCNF1Q9H3M0 494 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 EPS8L2Q9H6S3 715 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF552Q9H707 407 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 TAS2R13Q9NYV9 303 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 KLHL42Q9P2K6 505 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 TRPC4Q9UBN4 977 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 C3orf18Q9UK00 162 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 CDC14AQ9UNH5 594 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 CHMP2BQ9UQN3 213 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 RUVBL1Q9Y265 456 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 B3GNT3Q9Y2A9 372 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 MED16Q9Y2X0 877 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 SVILO95425 2214 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 IGKV1-8A0A0C4DH67 115 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 BLACEA4D250 179 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 E7ENX8 843 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 H7BY64 318 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 GFYI3L273 518 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 EIF3FO00303 357 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 TXNDC9O14530 226 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 STATHP02808 62 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 C8GP07360 202 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 HEXBP07686 556 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 CXCR2P25025 360 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 GLRBP48167 497 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 GNG11P61952 73 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 DR1Q01658 176 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 TAP2Q03519 686 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 EEF1A2Q05639 463 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 SP140Q13342 867 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 PDAP1Q13442 181 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 HIF1AQ16665 826 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 PRTGQ2VWP7 1150 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 PLEKHN1Q494U1 663 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 VWA2Q5GFL6 755 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 HP1BP3Q5SSJ5 553 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 RBM20Q5T481 1227 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 MFSD4BQ5TF39 518 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 AGAP7PQ5VUJ5 663 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 FAAH2Q6GMR7 532 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF425Q6IV72 752 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 FBXO42Q6P3S6 717 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 KIRREL2Q6UWL6 708 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 MBOAT1Q6ZNC8 495 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 PDIK1LQ8N165 341 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 GPATCH11Q8N954 259 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 OR11G2Q8NGC1 345 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 EEF1AKMT1Q8WVE0 214 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 C8orf44Q96CB5 159 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 LINGO1Q96FE5 620 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 CERS2Q96G23 380 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 THOC3Q96J01 351 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 RUNDC3BQ96NL0 473 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 PRAP1Q96NZ9 151 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 AGAP4Q96P64 663 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 WDR77Q9BQA1 342 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 LHPPQ9H008 270 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF160Q9HCG1 818 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 LRRC4CQ9HCJ2 640 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 C14orf105Q9NVL8 296 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 SLC17A6Q9P2U8 582 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
NPLOC4-212ENST00000573328 USP9XQ93008 2570 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 A0A0A6YYC8 382 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 NSG1A0A0A6YYJ2 146 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 VSTM2BA6NLU5 285 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 IDSB3KWA1 339 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 I3L1I5 382 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 P2RX6O15547 441 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ONECUT2O95948 504 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HPP00738 406 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HIST1H2AGP0C0S8 130 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 HIST1H2ADP20671 130 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 GRK3P35626 688 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 ELK3P41970 407 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 PAFAH1B1P43034 410 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 AVPR1BP47901 424 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 EMP2P54851 167 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 EMP3P54852 163 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 SOX8P57073 446 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 RPS15AP62244 130 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 SPTBN1Q01082 2364 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 MRPL49Q13405 166 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 DSG2Q14126 1118 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 MORF4L2Q15014 288 aa9.18□□□□□ -0.94
NPLOC4-212ENST00000573328 NR6A1Q15406 480 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms