RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 HAT1O14929 419 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ZNF749O43361 778 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 SUPT3HO75486 399 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 CDH1P12830 882 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 LIFP15018 202 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 EZRP15311 586 aaKnown RBP15.14■□□□□ 0.01
CHD3-215ENST00000572750 HSD17B3P37058 310 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 SLC26A3P40879 764 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 STAT5AP42229 794 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ABATP80404 500 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 GPS2Q13227 327 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 MAP7Q14244 749 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 NAA30Q147X3 362 aaPredicted RBP15.14■□□□□ 0.01
CHD3-215ENST00000572750 PTCHD3Q3KNS1 767 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 MANEAQ5SRI9 462 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ADGRD1Q6QNK2 874 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 LCTLQ6UWM7 567 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ISCA2Q86U28 154 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 C17orf64Q86WR6 236 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 PLD3Q8IV08 490 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ESX1Q8N693 406 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ZNF655Q8N720 491 aaPredicted RBP15.14■□□□□ 0.01
CHD3-215ENST00000572750 RHBDF1Q96CC6 855 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 CLIP3Q96DZ5 547 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ZFYVE21Q9BQ24 234 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 TMEM79Q9BSE2 394 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 NMRAL1Q9HBL8 299 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 CPNE5Q9HCH3 593 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 STARD5Q9NSY2 213 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 WWOXQ9NZC7 414 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 CD274Q9NZQ7 290 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 ANKMY1Q9P2S6 941 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 PSMC3IPQ9P2W1 217 aaPredicted RBP15.14■□□□□ 0.01
CHD3-215ENST00000572750 PCDHB3Q9Y5E6 796 aa15.14■□□□□ 0.01
CHD3-215ENST00000572750 BSNQ9UPA5 3926 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 LOC105369274A0A096LPK9 316 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 LOC102723532A0A0G2JNH3 316 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 LOC101059948A0A1B0GTJ6 334 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 H7BY64 318 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 UBXN8O00124 270 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 KERAO60938 352 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 WDR47O94967 919 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 KLHL2O95198 593 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 SNRPAP09012 282 aaKnown RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 WT1P19544 449 aaPredicted RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 GDF5P43026 501 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 SLCO1A2P46721 670 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 KCNC1P48547 511 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 HNMTP50135 292 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 VSX2P58304 361 aaPredicted RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 FAM83EQ2M2I3 478 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 ZC3H12BQ5HYM0 836 aaKnown RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 BROXQ5VW32 411 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 THOC6Q86W42 341 aaKnown RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 OR4N4Q8N0Y3 316 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 PLD6Q8N2A8 252 aaKnown RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 PDPRQ8NCN5 879 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 PRAP1Q96NZ9 151 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 CCNL2Q96S94 520 aaPredicted RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 ATOH8Q96SQ7 321 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 HAUS8Q9BT25 410 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 PARD6BQ9BYG5 372 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 SLC7A5P2Q9GIP4 190 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 AKIRIN1Q9H9L7 192 aaPredicted RBP15.13■□□□□ 0.01
CHD3-215ENST00000572750 PCMTD2Q9NV79 361 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 FETUBQ9UGM5 382 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 TBK1Q9UHD2 729 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 SLC22A14Q9Y267 594 aa15.13■□□□□ 0.01
CHD3-215ENST00000572750 ANKRD17O75179 2603 aaKnown RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 TAPBPO15533 448 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 STATHP02808 62 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 S100BP04271 92 aaPredicted RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 EIF2S1P05198 315 aaKnown RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 NPPBP16860 134 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 RORAP35398 523 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 SLC6A12P48065 614 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 TMPRSS3P57727 454 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 MEF2AQ02078 507 aaPredicted RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 ABHD18Q0P651 414 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 C1orf189Q5VU69 101 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 KLC3Q6P597 504 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 FAM199XQ6PEV8 388 aaPredicted RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 GPR155Q7Z3F1 870 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 TMPRSS11BQ86T26 416 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 STAG3L4Q8TBR4 150 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 CT55Q8WUE5 264 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 NEIL2Q969S2 332 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 ESAMQ96AP7 390 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 ZNF285Q96NJ3 590 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 GPR78Q96P69 363 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 LHX9Q9NQ69 397 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 ZNF358Q9NW07 568 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 NUDT4Q9NZJ9 180 aa15.12■□□□□ 0.01
CHD3-215ENST00000572750 DHCR7Q9UBM7 475 aaKnown RBP15.12■□□□□ 0.01
CHD3-215ENST00000572750 CROTQ9UKG9 612 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms