RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 BFSP1Q12934 665 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 FGFBP1Q14512 234 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ALG11Q2TAA5 492 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 KRTAP24-1Q3LI83 254 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SLC39A12Q504Y0 691 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SLC45A4Q5BKX6 768 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 WSCD1Q658N2 575 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CENPPQ6IPU0 288 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SLC36A4Q6YBV0 504 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 C4orf50Q6ZRC1 276 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CLEC17AQ6ZS10 378 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 EFCAB13Q8IY85 973 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ADSSL1Q8N142 457 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 PDCL2Q8N4E4 241 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 MLKLQ8NB16 471 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SPPL2BQ8TCT7 592 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CD101Q93033 1021 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CEP295NLQ96MC4 621 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 FGFBP2Q9BYJ0 223 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 MTMR12Q9C0I1 747 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SLC25A18Q9H1K4 315 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SNX25Q9H3E2 840 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 POMKQ9H5K3 350 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 PPP1R3EQ9H7J1 279 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 KLHL1Q9NR64 748 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ASAH2Q9NR71 780 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 TMEM30AQ9NV96 361 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 DMAC2Q9NW81 257 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 DDX43Q9NXZ2 648 aaKnown RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 GDE1Q9NZC3 331 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ARMCX3Q9UH62 379 aaPredicted RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 CDH9Q9ULB4 789 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 TTC7AQ9ULT0 858 aaPredicted RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 AAR2Q9Y312 384 aaKnown RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 CEPT1Q9Y6K0 416 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 MYH11P35749 1972 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ATP8B3O60423 1300 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CLUHO75153 1309 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 PLXNA4Q9HCM2 1894 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 KIAA1671Q9BY89 1806 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 A0A0B4J293 547 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 A6NLC8 198 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 A8MXQ7 604 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ADAM12O43184 909 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 N4BP1O75113 896 aaKnown RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 AKAP3O75969 853 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 MBD3O95983 291 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 UMODP07911 640 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 CCDC192P0DO97 292 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 LAMP2P13473 410 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 S1PR1P21453 382 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 WARSP23381 471 aaKnown RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 CCNE1P24864 410 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ANXA13P27216 316 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 PIK3CAP42336 1068 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 FASLGP48023 281 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ZNF132P52740 706 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 SLC8A3P57103 927 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 YWHAEP62258 255 aaKnown RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 TWF1Q12792 350 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 DRAP1Q14919 205 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 CAMK4Q16566 473 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 SYT16Q17RD7 645 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ZNF699Q32M78 642 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 CFAP221Q4G0U5 840 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 CCDC40Q4G0X9 1142 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 KCNT1Q5JUK3 1230 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 TMEM31Q5JXX7 168 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 KRT39Q6A163 491 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 HIST2H2BCQ6DN03 193 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 HIST2H2BDQ6DRA6 164 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ACAD10Q6JQN1 1059 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 TRNP1Q6NT89 227 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 GET4Q7L5D6 327 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 UNC93AQ86WB7 457 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 HEATR4Q86WZ0 1026 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 FAM114A1Q8IWE2 563 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ADGRF2Q8IZF7 708 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 OR5B17Q8NGF7 314 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 NR4A3Q92570 626 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 FGF13Q92913 245 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 ABTB1Q969K4 478 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 ZNF707Q96C28 371 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 FEM1CQ96JP0 617 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 PGLYRP2Q96PD5 576 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 GCNAQ96QF7 691 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 SEPT5Q99719 369 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 MFSD1Q9H3U5 465 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 FAM124BQ9H5Z6 455 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 CYP3A43Q9HB55 503 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 SLC6A13Q9NSD5 602 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 EPS15L1Q9UBC2 864 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 UXTQ9UBK9 157 aaPredicted RBP3.89□□□□□ -1.79
NUP88-202ENST00000570937 MUTYHQ9UIF7 546 aa3.89□□□□□ -1.79
NUP88-202ENST00000570937 HAO1Q9UJM8 370 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms