RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 OR6B2Q6IFH4 312 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SULT1C3Q6IMI6 304 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ZNF425Q6IV72 752 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 C1orf94Q6P1W5 598 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FAM122CQ6P4D5 195 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LCLAT1Q6UWP7 414 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 HFE2Q6ZVN8 426 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CYP4V2Q6ZWL3 525 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC24A5Q71RS6 500 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 BZW1Q7L1Q6 419 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SYT13Q7L8C5 426 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GPRIN1Q7Z2K8 1008 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FAM122BQ7Z309 247 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 VTCN1Q7Z7D3 282 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CUZD1Q86UP6 607 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 EXOC3L1Q86VI1 746 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ECHDC2Q86YB7 292 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ZNF280BQ86YH2 543 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC13A5Q86YT5 568 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 PLCZ1Q86YW0 608 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TICAM1Q8IUC6 712 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ARID3BQ8IVW6 561 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 APLFQ8IW19 511 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 FAM126BQ8IXS8 530 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PM20D2Q8IYS1 436 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 KATNAL2Q8IYT4 538 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SVOPQ8N4V2 548 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TBC1D19Q8N5T2 526 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LZTR1Q8N653 840 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TOP6BLQ8N6T0 577 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LRRC52Q8N7C0 313 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PRELID2Q8N945 189 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NETO2Q8NC67 525 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TMEM35BQ8NCS4 154 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CCNYQ8ND76 341 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR8J1Q8NGP2 316 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR10T2Q8NGX3 314 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FANK1Q8TC84 345 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LRRC20Q8TCA0 184 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 BRIX1Q8TDN6 353 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 RHBDD1Q8TEB9 315 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 AENQ8WTP8 325 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 HAUS1Q96CS2 278 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RNFT2Q96EX2 444 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MCRS1Q96EZ8 462 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PLPPR2Q96GM1 343 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PRR11Q96HE9 360 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 B3GALT6Q96L58 329 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SENP8Q96LD8 212 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LURAP1Q96LR2 239 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 COQ10AQ96MF6 247 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GLT1D1Q96MS3 346 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NECTIN4Q96NY8 510 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FCRL3Q96P31 734 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 DEFB118Q96PH6 123 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLITRK1Q96PX8 696 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 BBS4Q96RK4 519 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ZNF607Q96SK3 696 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RTP3Q9BQQ7 232 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC12A9Q9BXP2 914 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OSBPL6Q9BZF3 934 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MIS12Q9H081 205 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LHX5Q9H2C1 402 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR52A5Q9H2C5 316 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CLEC4MQ9H2X3 399 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 EPB41L1Q9H4G0 881 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RGCCQ9H4X1 137 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RUBCNLQ9H714 662 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 METTL8Q9H825 291 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 KIF9Q9HAQ2 790 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MRPS30Q9NP92 439 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 ACSS2Q9NR19 701 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GDF3Q9NR23 364 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PCDHB16Q9NRJ7 776 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TMLHEQ9NVH6 421 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMG6-208ENST00000570874 PSMC3IPQ9P2W1 217 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NCDNQ9UBB6 729 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SAE1Q9UBE0 346 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 TNFRSF10DQ9UBN6 386 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 WNT16Q9UBV4 365 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 IL20RAQ9UHF4 553 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 VPS51Q9UID3 782 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CA14Q9ULX7 337 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NFU1Q9UMS0 254 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 DAPP1Q9UN19 280 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CDC14AQ9UNH5 594 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 AP4E1Q9UPM8 1137 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RNF24Q9Y225 148 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FCF1Q9Y324 198 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 IFT52Q9Y366 437 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PCDHB1Q9Y5F3 818 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PCDHA3Q9Y5H8 950 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PUS1Q9Y606 427 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMG6-208ENST00000570874 ZNF106Q9H2Y7 1883 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 LOC100509620A0A075B734 347 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 A0A087WV48 116 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 A0A0U1RQF3 1178 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms