RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SEMA3GQ9NS98 782 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 MAP10Q9P2G4 905 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 RP1L1Q8IWN7 2480 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 E7ENX8 843 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 H0YGG7 62 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRPF4O43172 522 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 HAUS5O94927 633 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 FBLP22087 321 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 VARSP26640 1264 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 RGS4P49798 205 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 ARF3P61204 181 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 ABATP80404 500 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 TAP2Q03519 686 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRDX1Q06830 199 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 INPP5JQ15735 1006 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRTGQ2VWP7 1150 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 BBS9Q3SYG4 887 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 PAQR7Q86WK9 346 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 TMEM151BQ8IW70 566 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 FAM26EQ8N5C1 309 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 DTWD1Q8N5C7 304 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 C2CD4AQ8NCU7 369 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 MIEF2Q96C03 454 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 CAPZA3Q96KX2 299 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 NDNQ99608 321 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 CRB3Q9BUF7 120 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC29A3Q9BZD2 475 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF282Q9UDV7 671 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 PCYOX1Q9UHG3 505 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 CDC14AQ9UNH5 594 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 MAP4K5Q9Y4K4 846 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 HS3ST3B1Q9Y662 390 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 MAST4O15021 2626 aa11.79□□□□□ -0.52
CTDNEP1-205ENST00000570828 VSTM2BA6NLU5 285 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 GFYI3L273 518 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MASP2O00187 686 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 TXNDC9O14530 226 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 SOCS6O14544 535 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 ALOX12BO75342 701 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 BANF1O75531 89 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MED26O95402 600 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 IMPA1P29218 277 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 SKIV2L2P42285 1042 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 UQCRFS1P47985 274 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 SOX8P57073 446 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 GNG11P61952 73 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 SP140Q13342 867 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MORF4L2Q15014 288 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRAMEF13Q5VWM6 474 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF425Q6IV72 752 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 FBXO42Q6P3S6 717 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 CYHR1Q6ZMK1 362 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 SYDE1Q6ZW31 735 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PALM2Q8IXS6 379 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRSS58Q8IYP2 241 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PDIK1LQ8N165 341 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MYO1HQ8N1T3 1032 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 Q8NA96 180 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 STT3BQ8TCJ2 826 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MCOLN3Q8TDD5 553 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 MVB12AQ96EY5 273 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 ILKAPQ9H0C8 392 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 CCDC177Q9NQR7 707 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 STOX2Q9P2F5 926 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 RUVBL1Q9Y265 456 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 B3GNT3Q9Y2A9 372 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
CTDNEP1-205ENST00000570828 FER1L5A0AVI2 2057 aa11.77□□□□□ -0.52
CTDNEP1-205ENST00000570828 CLEC18AA5D8T8 446 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 PABPN1LA6NDY0 278 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 MAP2K7O14733 419 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 HAT1O14929 419 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 C8GP07360 202 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 ANXA5P08758 320 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZGLP1P0C6A0 271 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 ACPPP15309 386 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 GNLYP22749 145 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 TBPL1P62380 186 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 DR1Q01658 176 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 RELAQ04206 551 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 KLC1Q07866 573 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 HKDC1Q2TB90 917 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 PRR30Q53SZ7 412 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 GARNL3Q5VVW2 1013 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms