RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CCR7P32248 378 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 MASP1P48740 699 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CLK3P49761 638 aaKnown RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 CSTF3Q12996 717 aaKnown RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 GPR149Q86SP6 731 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 LINC01599Q8WXQ3 324 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 TMEM159Q96B96 161 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 DUSP26Q9BV47 211 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 FBXO10Q9UK96 956 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 POU2F3Q9UKI9 436 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ANKRD28O15084 1053 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 HPRP00739 348 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 ACPPP15309 386 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 EPORP19235 508 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CR2P20023 1033 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 NSG1P42857 185 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 SMARCB1Q12824 385 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 SPATS1Q496A3 300 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 SPANXN2Q5MJ10 180 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 KIAA1614Q5VZ46 1190 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CST9Q5W186 159 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CXorf57Q6NSI4 855 aaKnown RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 HJURPQ8NCD3 748 aaPredicted RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 DMRTB1Q96MA1 342 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 VPS35Q96QK1 796 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CDK5RAP1Q96SZ6 601 aaKnown RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 TMEM121BQ9BXQ6 578 aaPredicted RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 SLCO3A1Q9UIG8 710 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CLEC4EQ9ULY5 219 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 PDCD11Q14690 1871 aaKnown RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 TGFB1P01137 390 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 FPR1P21462 350 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 NR4A2P43354 598 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 ELAVL2Q12926 359 aaKnown RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 NPRL3Q12980 569 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 ATG9BQ674R7 924 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 GTF2IRD2BQ6EKJ0 949 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 GTF2IRD2Q86UP8 949 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 AMER2Q8N7J2 671 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 MTG2Q9H4K7 406 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 BRCA1P38398 1863 aaKnown RBP14.85□□□□□ -0.03
USP43-202ENST00000570475 WDR90Q96KV7 1748 aa14.85□□□□□ -0.03
USP43-202ENST00000570475 CLDN8P56748 225 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 CTF1Q16619 201 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 RGMBQ6NW40 437 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 TMEM53Q6P2H8 277 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 SLC16A12Q6ZSM3 486 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 USP45Q70EL2 814 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 ISG20Q96AZ6 181 aaKnown RBP14.84□□□□□ -0.03
USP43-202ENST00000570475 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 MYLKQ15746 1914 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 M0QX08 132 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 PRPS2P11908 318 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 RCVRNP35243 200 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 Q6ZVU0 165 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 ANKRD13BQ86YJ7 626 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 VANGL1Q8TAA9 524 aaPredicted RBP14.84□□□□□ -0.03
USP43-202ENST00000570475 P2RY13Q9BPV8 354 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 OR51E2Q9H255 320 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 DSN1Q9H410 356 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 VPS29Q9UBQ0 182 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 LHX3Q9UBR4 397 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 NYNRINQ9P2P1 1898 aaKnown RBP14.84□□□□□ -0.03
USP43-202ENST00000570475 SULT1C4O75897 302 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 SOX14O95416 240 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 CCDC159P0C7I6 412 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 BDKRB1P46663 353 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 DUOXA1Q1HG43 343 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 INAVAQ3KP66 663 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 Q6ZVL8 140 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 SPATC1Q76KD6 591 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 CPPED1Q9BRF8 314 aaPredicted RBP14.84□□□□□ -0.03
USP43-202ENST00000570475 TMEFF2Q9UIK5 374 aaPredicted RBP14.84□□□□□ -0.03
USP43-202ENST00000570475 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
USP43-202ENST00000570475 A6NL46 340 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 C5orf58C9J3I9 102 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 AREL1O15033 823 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 MED26O95402 600 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 ETFAP13804 333 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 ITIH1P19827 911 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 TCEA2Q15560 299 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 SPDYE7PQ495Y7 208 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 MRPS31Q92665 395 aaKnown RBP14.83□□□□□ -0.03
USP43-202ENST00000570475 PKP4Q99569 1192 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 DOK1Q99704 481 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 P2RY12Q9H244 342 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 TRIM39Q9HCM9 518 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 MBD1Q9UIS9 605 aaPredicted RBP14.83□□□□□ -0.03
USP43-202ENST00000570475 RNF6Q9Y252 685 aa14.83□□□□□ -0.03
USP43-202ENST00000570475 KLK8O60259 260 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 GSTT2P0CG29 244 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 GSTT2BP0CG30 244 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 CD70P32970 193 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 GRK3P35626 688 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 EPHB3P54753 998 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 AP1S1P61966 158 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 IFITM3Q01628 133 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 MVKQ03426 396 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 ZNF404Q494X3 552 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 ARMCX4Q5H9R4 360 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms