RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 FAM234BA2RU67 622 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 FXYD1O00168 92 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 JAK1P23458 1154 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 MTTPP55157 894 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 RPL6Q02878 288 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 CAPRIN1Q14444 709 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SMU1Q2TAY7 513 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 VN1R5Q7Z5H4 357 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 EGLN2Q96KS0 407 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 TSSK3Q96PN8 268 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 ASIC5Q9NY37 505 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SPHK1Q9NYA1 384 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 SLAMF8Q9P0V8 285 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 GMPR2Q9P2T1 348 aaKnown RBP10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 VPS29Q9UBQ0 182 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 NDUFAF1Q9Y375 327 aa10.53□□□□□ -0.72
PDXDC1-216ENST00000569715 IGKV1-8A0A0C4DH67 115 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 A0A1W2PP18 115 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 METTL12A8MUP2 240 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 HSD17B2P37059 387 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC19A1P41440 591 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 MAD2L1Q13257 205 aaPredicted RBP10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 RIPK1Q13546 671 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 CACHD1Q5VU97 1274 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 FBXW8Q8N3Y1 598 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 FAM156AQ8NDB6 213 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 GPR156Q8NFN8 814 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 OR2L8Q8NGY9 312 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 PCOLCE2Q9UKZ9 415 aa10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 TP53BP1Q12888 1972 aaPredicted RBP10.52□□□□□ -0.72
PDXDC1-216ENST00000569715 VPS13AQ96RL7 3174 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 BBIP1A8MTZ0 92 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 NPIPB8E9PQR5 432 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 H7BY64 318 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 F3P13726 295 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 RPS9P46781 194 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 C1orf61Q13536 156 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 TLR1Q15399 786 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 PIGGQ5H8A4 983 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 WASH2PQ6VEQ5 465 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 OR2A1Q8NGT9 310 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 KLHDC7BQ96G42 594 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 PRAP1Q96NZ9 151 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 WASH6PQ9NQA3 447 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 DMRT3Q9NQL9 472 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 FEZF1A0PJY2 475 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 TOR1BO14657 336 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 LRATO95237 230 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 TNFP01375 233 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.735e-6■■■■□ 19.3
PDXDC1-216ENST00000569715 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 WASHC2DQ5SRD0 308 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 ICE2Q659A1 982 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 NOXRED1Q6NXP6 359 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 PLD3Q8IV08 490 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 GPBAR1Q8TDU6 330 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 GFM2Q969S9 779 aaKnown RBP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 HSPA12BQ96MM6 686 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 BRF2Q9HAW0 419 aa10.52□□□□□ -0.73
PDXDC1-216ENST00000569715 ZNF839A8K0R7 811 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 MAP3K13O43283 966 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 EEDO75530 441 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CIB2O75838 187 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 B3GALT4O96024 378 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TGFB1P01137 390 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CD27P26842 260 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CXCL12P48061 93 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CYP4F2P78329 520 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 RAE1P78406 368 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 PLIN5Q00G26 463 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ZNF423Q2M1K9 1284 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 FAM174BQ3ZCQ3 159 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 SPANXN4Q5MJ08 99 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TSSK4Q6SA08 328 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 NET1Q7Z628 596 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 C1orf52Q8N6N3 182 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ANKRD53Q8N9V6 530 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 OR4E2Q8NGC2 313 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 C11orf24Q96F05 449 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 FCRL1Q96LA6 429 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 DPY30Q9C005 99 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 MIR1-1HGQ9H1L0 117 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 OR51B5Q9H339 312 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 KIR3DX1Q9H7L2 352 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ADA2Q9NZK5 511 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TAAR2Q9P1P5 351 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 PRPF19Q9UMS4 504 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 POMPQ9Y244 141 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HEBP2Q9Y5Z4 205 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms