RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR4N4Q8N0Y3 316 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 EXD3Q8N9H8 876 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 OR56A3Q8NH54 315 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 ALKBH8Q96BT7 664 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 DERL2Q9GZP9 239 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 CAB39LQ9H9S4 337 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 CUEDC1Q9NWM3 386 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NINJ2Q9NZG7 142 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 CTNNAL1Q9UBT7 734 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NDOR1Q9UHB4 597 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
HERPUD1-218ENST00000569569 NPEPPSL1A6NEC2 478 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 TXNDC9O14530 226 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 ONECUT2O95948 504 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 ANXA5P08758 320 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 CCDC166P0CW27 439 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 SFTPCP11686 197 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 ECHS1P30084 290 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 EMP3P54852 163 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 RAB10P61026 200 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 CDKL1Q00532 357 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 PPP1R3AQ16821 1122 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 THAP4Q8WY91 577 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 RERGQ96A58 199 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 PYCR2Q96C36 320 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 OR2A5Q96R48 311 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 CYTH2Q99418 400 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 HAUS8Q9BT25 410 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 CDC42EP4Q9H3Q1 356 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 OARD1Q9Y530 152 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 NUP210LQ5VU65 1888 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 SCN2AQ99250 2005 aa13.2□□□□□ -0.3
HERPUD1-218ENST00000569569 HAT1O14929 419 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 PHGDHO43175 533 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 KLF7O75840 302 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 HNMTP50135 292 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 POLE2P56282 527 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 ATP6V0D1P61421 351 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 NFKB2Q00653 900 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 IL10RAQ13651 578 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.38e-9■■■■□ 19.7
HERPUD1-218ENST00000569569 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 MRPL14Q6P1L8 145 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 ADAMTS17Q8TE56 1095 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 UBXN10Q96LJ8 280 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 EGFL8Q99944 293 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 FUT8Q9BYC5 575 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 ACSS3Q9H6R3 686 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
HERPUD1-218ENST00000569569 DOCK10Q96BY6 2186 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 ALBP02768 609 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 PRB1P04280 392 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CDH1P12830 882 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CD1DP15813 335 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CRABP2P29373 138 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 GRK3P35626 688 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CSNK1G2P78368 415 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CSHL1Q14406 222 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SSPNQ14714 243 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC9A5Q14940 896 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 TGFBIQ15582 683 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 GARNL3Q5VVW2 1013 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 RAPH1Q70E73 1250 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 OVCH1Q7RTY7 1134 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 PLD3Q8IV08 490 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SPATA6LQ8N4H0 392 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CSNK1A1LQ8N752 337 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 FKBP10Q96AY3 582 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 MRRFQ96E11 262 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SYNPO2LQ9H987 977 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 ZNF304Q9HCX3 659 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC22A11Q9NSA0 550 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 RUVBL1Q9Y265 456 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 PTRH2Q9Y3E5 179 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-218ENST00000569569 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 MED26O95402 600 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms