RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MKL2Q9ULH7 1088 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 DUSP10Q9Y6W6 482 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 CPAMD8Q8IZJ3 1885 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 PDZD2O15018 2839 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 C2CD3Q4AC94 2353 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 MYO7BQ6PIF6 2116 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 GRID2IPA4D2P6 1211 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 AVPR1BP47901 424 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 ADARP55265 1226 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 ABATP80404 500 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 PRDX1Q06830 199 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 SKOR2Q2VWA4 1001 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 CCSMST1Q4G0I0 132 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF766Q5HY98 468 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 RNF187Q5TA31 235 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 PLAG1Q6DJT9 500 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 FAAH2Q6GMR7 532 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 LRRC8BQ6P9F7 803 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 Q6ZPB1 254 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 LDB1Q86U70 411 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 PAQR7Q86WK9 346 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 EID3Q8N140 333 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 TXLNBQ8N3L3 684 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 TAB3Q8N5C8 712 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 C14orf79Q96F83 325 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 OR2A5Q96R48 311 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 EBNA1BP2Q99848 306 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 IL22Q9GZX6 179 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 TSPY26PQ9H489 355 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 MARCH4Q9P2E8 410 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 R3HDM2Q9Y2K5 976 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF835Q9Y2P0 537 aa14.93□□□□□ -0.02
HERPUD1-215ENST00000568676 H0YIG0 161 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 MYO1CO00159 1063 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 TTI1O43156 1089 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 NRP2O60462 931 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 CLDN14O95500 239 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 F10P00742 488 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 FASTKQ14296 549 aaKnown RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 GBX1Q14549 363 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 OASLQ15646 514 aaKnown RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 HKDC1Q2TB90 917 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF425Q6IV72 752 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 MRNIPQ6NTE8 343 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 H3F3CQ6NXT2 135 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 NEK10Q6ZWH5 1172 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 SDCCAG8Q86SQ7 713 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 ZC3H7AQ8IWR0 971 aaKnown RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 ARHGEF39Q8N4T4 335 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 MCOLN3Q8TDD5 553 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 GPR137Q96N19 417 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 TCF12Q99081 682 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 ACAT2Q9BWD1 397 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 CHRAC1Q9NRG0 131 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 RAB6BQ9NRW1 208 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 TREX1Q9NSU2 369 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 STOX2Q9P2F5 926 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 SH3BGRL2Q9UJC5 107 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 F8P00451 2351 aa14.92□□□□□ -0.02
HERPUD1-215ENST00000568676 FOXS1O43638 330 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 PSIP1O75475 530 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 IFNB1P01574 187 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 ESR1P03372 595 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 CATP04040 527 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 APRTP07741 180 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 CELA2AP08217 269 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 SNRPB2P08579 225 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 GRIA1P42261 906 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 AGTR2P50052 363 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 EIF3BP55884 814 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 ADORA2A-AS1P86434 159 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 PTK6Q13882 451 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 ACER2Q5QJU3 275 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 ICE2Q659A1 982 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 CPEB2Q7Z5Q1 589 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 SPPL2CQ8IUH8 684 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 HORMAD2Q8N7B1 307 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 TMEM178AQ8NBL3 297 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 FAM98AQ8NCA5 519 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 SPOCK3Q9BQ16 436 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 TRIM5Q9C035 493 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 LACRTQ9GZZ8 138 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 EIF2B3Q9NR50 452 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 PAK5Q9P286 719 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF148Q9UQR1 794 aa14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 RUVBL2Q9Y230 463 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-215ENST00000568676 A0A0A6YYC8 382 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 IGKV1-8A0A0C4DH67 115 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 ASPDHA6ND91 283 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 SOWAHDA6NJG2 315 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 I3L1I5 382 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 LIASO43766 372 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 NSA2O95478 260 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 HRH2P25021 359 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 EEF1DP29692 281 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 NPY2RP49146 381 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 PNLIPRP1P54315 467 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 EXT1Q16394 746 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 C3AR1Q16581 482 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms