RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	SNRNP200	O75643	2136 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	ADAMTS20	P59510	1910 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	IGHV5-51	A0A0C4DH38	117 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	IGKV1-8	A0A0C4DH67	115 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	SLC9B1P1	A6NJY1	282 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626		E7EQ34	232 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CASC3	O15234	703 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	KIF1C	O43896	1103 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	NPHS1	O60500	1241 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	C1GALT1C1L	P0DN25	315 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	NEFH	P12036	1026 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	PVR	P15151	417 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	EPOR	P19235	508 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	GRK2	P25098	689 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	MPST	P25325	297 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	HNF4A	P41235	474 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	MLLT3	P42568	568 aa	Predicted RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CASP2	P42575	452 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	LSS	P48449	732 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CCNG1	P51959	295 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	NAGLU	P54802	743 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	PKNOX1	P55347	436 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	WDR4	P57081	412 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	RPS15A	P62244	130 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	REEP5	Q00765	189 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	ACY1	Q03154	408 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	GALNT1	Q10472	559 aa	Predicted RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	RBBP7	Q16576	425 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	GGTA1P	Q4G0N0	100 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	UNC50	Q53HI1	259 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	XKR6	Q5GH73	641 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	C10orf62	Q5T681	223 aa	Predicted RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	LIPJ	Q5W064	366 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	FIGLA	Q6QHK4	219 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	SLCO4C1	Q6ZQN7	724 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	RNF44	Q7L0R7	432 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	B3GNT8	Q7Z7M8	397 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	PAQR7	Q86WK9	346 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	KIRREL3	Q8IZU9	778 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	KRT78	Q8N1N4	520 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	D2HGDH	Q8N465	521 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CCNYL1	Q8N7R7	359 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	OR4K1	Q8NGD4	311 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	MGARP	Q8TDB4	240 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	ATP6V1E2	Q96A05	226 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	THAP11	Q96EK4	314 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	SEC16B	Q96JE7	1060 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CNDP1	Q96KN2	507 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	PAIP2	Q9BPZ3	127 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	MECR	Q9BV79	373 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	NTMT1	Q9BV86	223 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	SARG	Q9BW04	601 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	GATA5	Q9BWX5	397 aa	Predicted RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	DRC3	Q9H069	523 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	GSTO2	Q9H4Y5	243 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	NOL11	Q9H8H0	719 aa	Known RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	FANCE	Q9HB96	536 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	SH2B3	Q9UQQ2	575 aa		11.53	□□□□□ -0.56
FANCA-231	ENST00000568626	CCDC187	A0A096LP49	1063 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	TRBC2	A0A5B9	178 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	LRRC14B	A6NHZ5	514 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626		A8MU76	341 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	TMEM114	B3SHH9	223 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626		H7BY64	318 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	WFS1	O76024	890 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	CLDN9	O95484	217 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	SERPINE1	P05121	402 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	EBLN1	P0CF75	366 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	FGF3	P11487	239 aa	Predicted RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	CHN1	P15882	459 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	SERPINB1	P30740	379 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	ARL1	P40616	181 aa	Predicted RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	SEPHS1	P49903	392 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	CSNK1G2	P78368	415 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	CHIT1	Q13231	466 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	RCN2	Q14257	317 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	C16orf72	Q14CZ0	275 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	FCRL6	Q6DN72	434 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	HIST2H2AA3	Q6FI13	130 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	TMPRSS7	Q7RTY8	843 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	BPHL	Q86WA6	291 aa	Predicted RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	FAM129C	Q86XR2	697 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	FAM20C	Q8IXL6	584 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	CHCHD4	Q8N4Q1	142 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	L3MBTL4	Q8NA19	623 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	TTL	Q8NG68	377 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	OR6Y1	Q8NGX8	325 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	DYDC1	Q8WWB3	177 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	REPS1	Q96D71	796 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	PPM1M	Q96MI6	270 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	PRAP1	Q96NZ9	151 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	ZFYVE21	Q9BQ24	234 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	NT5DC2	Q9H857	520 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	EML4	Q9HC35	981 aa	Known RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	MLXIPL	Q9NP71	852 aa		11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.52	□□□□□ -0.57
FANCA-231	ENST00000568626	INTS9	Q9NV88	658 aa	Known RBP	11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms