RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 NPTX1Q15818 432 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 NDUFA5Q16718 116 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF181Q2M3W8 571 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 FGD3Q5JSP0 725 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 RTP2Q5QGT7 225 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SPOUT1Q5T280 376 aaKnown RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CPTPQ5TA50 214 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 KDM4DQ6B0I6 523 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 GTF2IRD2BQ6EKJ0 949 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 GRHL2Q6ISB3 625 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 NOXRED1Q6NXP6 359 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 DOK6Q6PKX4 331 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 TRAF7Q6Q0C0 670 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF621Q6ZSS3 439 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 C16orf59Q7L2K0 433 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF605Q86T29 641 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SAPCD2Q86UD0 394 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 GTF2IRD2Q86UP8 949 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CYP4Z1Q86W10 505 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SLC44A2Q8IWA5 706 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZZZ3Q8IYH5 903 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CENPSQ8N2Z9 138 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 OXR1Q8N573 874 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 KIAA1958Q8N8K9 716 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 FBXO15Q8NCQ5 510 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 DENND6BQ8NEG7 585 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 GPR152Q8TDT2 470 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 NR4A3Q92570 626 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SLC38A4Q969I6 547 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 TMEM159Q96B96 161 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZHX1-C8orf76Q96EF9 292 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 HSPBAP1Q96EW2 488 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SH3YL1Q96HL8 342 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF514Q96K75 400 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 FCRL1Q96LA6 429 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 QRFPRQ96P65 431 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 MAPKAP1Q9BPZ7 522 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 TBCDQ9BTW9 1192 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ITPAQ9BY32 194 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 MROQ9BYG7 248 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ARHGAP39Q9C0H5 1083 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 BHLHE41Q9C0J9 482 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 LHPPQ9H008 270 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 RIBC2Q9H4K1 309 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ACTL8Q9H568 366 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 PIF1Q9H611 641 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 EPHX3Q9H6B9 360 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 MOV10Q9HCE1 1003 aaKnown RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CCDC177Q9NQR7 707 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SIRT5Q9NXA8 310 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 TBC1D14Q9P2M4 693 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 CRNNQ9UBG3 495 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 INTS6Q9UL03 887 aaKnown RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 MKLN1Q9UL63 735 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ANGPT4Q9Y264 503 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 PADI2Q9Y2J8 665 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 SAMHD1Q9Y3Z3 626 aaKnown RBP7.41□□□□□ -1.22
ATXN3-250ENST00000568290 DYRK1BQ9Y463 629 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 PEX16Q9Y5Y5 336 aa7.41□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF638Q14966 1978 aaKnown RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 CASP8AP2Q9UKL3 1982 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 A0A1W2PQ45 241 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 A0A1W2PQY0 241 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 FUOMA2VDF0 154 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 ARRDC5A6NEK1 342 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 C9JVG2 144 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PTGES3LE9PB15 166 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 LOC110117498-PIK3R3F6TDL0 507 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 GFYI3L273 518 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PSMD11O00231 422 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 RNASET2O00584 256 aaKnown RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 KDM1AO60341 852 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 LILRA1O75019 489 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 ATG13O75143 517 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 BCAS1O75363 584 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 GJB5O95377 273 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 SEC24AO95486 1093 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 OLFM2O95897 454 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PDYNP01213 254 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 LRG1P02750 347 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 RPN2P04844 631 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 RPLP0P05388 317 aaKnown RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 SPATA31D3P0C874 917 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF182P17025 639 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 BPIP17213 487 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 ENGP17813 658 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 CXCR2P25025 360 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PSMB9P28065 219 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 HSD17B2P37059 387 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 SLC6A12P48065 614 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PXNP49023 591 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PRIM2P49643 509 aa7.4□□□□□ -1.22
ATXN3-250ENST00000568290 PPP5CP53041 499 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms