RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 HIDE1A8MVS5 230 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 E9PBE3 544 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 I6L893 689 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 DENRO43583 198 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 BUD23O43709 281 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 KLHL41O60662 606 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SMIM24O75264 130 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 GPC4O75487 556 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 BCAS2O75934 225 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 VAPBO95292 243 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 C1RP00736 705 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 AHSGP02765 367 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 HLA-DQB2P05538 268 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 DCNP07585 359 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 LYNP07948 512 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 POU2F2P09086 479 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CD9P21926 228 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 BMP5P22003 454 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MPLP40238 635 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 RPS9P46781 194 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CACNA2D1P54289 1103 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 EPHB1P54762 984 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 NAGLUP54802 743 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TBX4P57082 545 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 STX1BP61266 288 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ATP6V0D1P61421 351 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 PRAMEP78395 509 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 POU6F2P78424 691 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ROR2Q01974 943 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ACVR1Q04771 509 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 FOXM1Q08050 763 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 IL10RBQ08334 325 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 NSUN2Q08J23 767 aaKnown RBP eCLIP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TRAP1Q12931 704 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 FLOT2Q14254 428 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TRIP10Q15642 601 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 PIGGQ5H8A4 983 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SAMD4BQ5PRF9 694 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 OGFRL1Q5TC84 451 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF470Q6ECI4 717 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 OR52E8Q6IFG1 317 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SLC30A9Q6PML9 568 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 KDELC1Q6UW63 502 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CES3Q6UWW8 571 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SLC24A5Q71RS6 500 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SNX32Q86XE0 403 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 DSELQ8IZU8 1212 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CENPLQ8N0S6 344 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MARVELD2Q8N4S9 558 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 PCYOX1LQ8NBM8 494 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 OR10T2Q8NGX3 314 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 RHEBL1Q8TAI7 183 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SPPL2BQ8TCT7 592 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SCAMP4Q969E2 229 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 POP5Q969H6 163 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ROPN1LQ96C74 230 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ASB9Q96DX5 294 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 L3HYPDHQ96EM0 354 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ATXN7L3BQ96GX2 97 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CELF6Q96J87 481 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ELMO2Q96JJ3 720 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 FEM1CQ96JP0 617 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 GPR78Q96P69 363 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 LENG8Q96PV6 779 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TSC22D3Q99576 134 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 C19orf43Q9BQ61 176 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 APOL5Q9BWW9 433 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MRPL9Q9BYD2 267 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SLC39A8Q9C0K1 460 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 POLR1EQ9GZS1 481 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MUC13Q9H3R2 512 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MEAF6Q9HAF1 191 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 VCX3AQ9NNX9 186 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ANLNQ9NQW6 1124 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TLR8Q9NR97 1041 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 RXFP3Q9NSD7 469 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SEMA4GQ9NTN9 838 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 INTS10Q9NVR2 710 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM161AQ9NX61 479 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 KCTD5Q9NXV2 234 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 IL37Q9NZH6 218 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CFAP97Q9P2B7 532 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SLC17A6Q9P2U8 582 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 SARDHQ9UL12 918 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 DMTF1Q9Y222 760 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 MRPS17Q9Y2R5 130 aaKnown RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 ZZEF1O43149 2961 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 LOC100653049A0A140TA62 436 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 LOC285095A0A1B0GVY8 99 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 TYW5A2RUC4 315 aaKnown RBP5.17□□□□□ -1.58
CAPN3-217ENST00000567817 DPPA5A6NC42 116 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 ENO4A6NNW6 628 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 ZAR1LA6NP61 321 aa5.17□□□□□ -1.58
CAPN3-217ENST00000567817 SYCE1LA8MT33 242 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms