RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 COL9A2Q14055 689 aaPredicted RBP20.69■□□□□ 0.9
NME3-210ENST00000567271 TGFBIQ15582 683 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 C1orf189Q5VU69 101 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 YOD1Q5VVQ6 348 aaPredicted RBP20.69■□□□□ 0.9
NME3-210ENST00000567271 CCDC91Q7Z6B0 441 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 TBC1D1Q86TI0 1168 aaPredicted RBP20.69■□□□□ 0.9
NME3-210ENST00000567271 GPSM1Q86YR5 675 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 TTC29Q8NA56 475 aaPredicted RBP20.69■□□□□ 0.9
NME3-210ENST00000567271 RHBDF1Q96CC6 855 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 FAM117AQ9C073 453 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 NMRAL1Q9HBL8 299 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 SNX15Q9NRS6 342 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 IGSF5Q9NSI5 407 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 TXLNGQ9NUQ3 528 aa20.69■□□□□ 0.9
NME3-210ENST00000567271 FARSAQ9Y285 508 aaKnown RBP20.69■□□□□ 0.9
NME3-210ENST00000567271 FAM208BQ5VWN6 2430 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 A0A087X1B8 175 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 ALDOAP04075 364 aaKnown RBP20.68■□□□□ 0.9
NME3-210ENST00000567271 EIF2S1P05198 315 aaKnown RBP20.68■□□□□ 0.9
NME3-210ENST00000567271 LTA4HP09960 611 aaKnown RBP20.68■□□□□ 0.9
NME3-210ENST00000567271 RAB40ALP0C0E4 278 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 ALAS2P22557 587 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 TNFRSF8P28908 595 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 PTPN4P29074 926 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 SERPINB8P50452 374 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 SERPINB9P50453 376 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 CSNK1G2P78368 415 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 DCDP81605 110 aaKnown RBP20.68■□□□□ 0.9
NME3-210ENST00000567271 MC1RQ01726 317 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 FAM214AQ32MH5 1076 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 CRTC2Q53ET0 693 aaPredicted RBP20.68■□□□□ 0.9
NME3-210ENST00000567271 TTLL10Q6ZVT0 673 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 ISCA2Q86U28 154 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 PLD3Q8IV08 490 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 DCAKDQ8WVC6 231 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 ANKZF1Q9H8Y5 726 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 CUTCQ9NTM9 273 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 ZNF180Q9UJW8 692 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 TLK1Q9UKI8 766 aa20.68■□□□□ 0.9
NME3-210ENST00000567271 IGSF10Q6WRI0 2623 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 NCF1BA6NI72 391 aaPredicted RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 NCF1CA8MVU1 366 aaPredicted RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 CREG1O75629 220 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 CDH1P12830 882 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 NCF1P14598 390 aaPredicted RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 TYK2P29597 1187 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 KCNC1P48547 511 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 IRF9Q00978 393 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 PRTGQ2VWP7 1150 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 CDKL4Q5MAI5 379 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 FAM198BQ6UWH4 519 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 THOC6Q86W42 341 aaKnown RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 KLHDC8AQ8IYD2 350 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 CENPLQ8N0S6 344 aaPredicted RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 ABHD11Q8NFV4 315 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 STAG3L4Q8TBR4 150 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 NXNL1Q96CM4 212 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 NLNQ9BYT8 704 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 EPB41L4BQ9H329 900 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 ACTL8Q9H568 366 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 ALG9Q9H6U8 611 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 RALYQ9UKM9 306 aaKnown RBP20.67■□□□□ 0.9
NME3-210ENST00000567271 RNF112Q9ULX5 631 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 SLC22A14Q9Y267 594 aa20.67■□□□□ 0.9
NME3-210ENST00000567271 KCNE1BA0A087WTH5 132 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 A0A096LPK6 155 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 EXOC1LA0A1B0GW35 172 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 A0A1B0GX78 115 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 HYKKA2RU49 373 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 DSCR3O14972 297 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 KRT38O76015 456 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 RECKO95980 971 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 TFEBP19484 476 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 CNTFP26441 200 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 SLC6A12P48065 614 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 SLC29A2Q14542 456 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 C18orf21Q32NC0 220 aaPredicted RBP20.66■□□□□ 0.9
NME3-210ENST00000567271 TAF1BQ53T94 588 aaPredicted RBP20.66■□□□□ 0.9
NME3-210ENST00000567271 TAOK1Q7L7X3 1001 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 TCAIMQ8N3R3 496 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 CSNK1A1LQ8N752 337 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 ENDOVQ8N8Q3 282 aaKnown RBP20.66■□□□□ 0.9
NME3-210ENST00000567271 OR4K1Q8NGD4 311 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 KCTD4Q8WVF5 259 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 SLC5A11Q8WWX8 675 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.66■□□□□ 0.9
NME3-210ENST00000567271 TTC9Q92623 222 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 ISL2Q96A47 359 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 RERGQ96A58 199 aaPredicted RBP20.66■□□□□ 0.9
NME3-210ENST00000567271 C17orf62Q9BQA9 187 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 DHRS4Q9BTZ2 278 aa20.66■□□□□ 0.9
NME3-210ENST00000567271 TAPBPO15533 448 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 SLU7O95391 586 aaKnown RBP20.65■□□□□ 0.9
NME3-210ENST00000567271 ITGB2P05107 769 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 PRKAR1AP10644 381 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 GCAP28676 217 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 GGT5P36269 586 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 MAGEA12P43365 314 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 CCR8P51685 355 aa20.65■□□□□ 0.9
NME3-210ENST00000567271 EMP3P54852 163 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms