RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SHANK1Q9Y566 2161 aa9.91□□□□□ -0.82
LINC00564-201ENST00000567258 PTPN13Q12923 2485 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 ARHGEF33A8MVX0 844 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 PRICKLE3O43900 615 aaPredicted RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 CTSVO60911 334 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 PSIP1O75475 530 aaKnown RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 ANXA5P08758 320 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 MPC1LP0DKB6 136 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 FBLP22087 321 aaKnown RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 CXCR2P25025 360 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 OR1D4P47884 311 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 RGS4P49798 205 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 PNLIPRP1P54315 467 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 ELOAQ14241 798 aaKnown RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 NKG7Q16617 165 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 CYP1B1Q16678 543 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 ACSBG2Q5FVE4 666 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 AGAP7PQ5VUJ5 663 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 PRAMEF13Q5VWM6 474 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 SLC6A19Q695T7 634 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 LINC00114Q6XXX2 140 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 KCNMB4Q86W47 210 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 SLC35F6Q8N357 371 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 METTL27Q8N6F8 245 aaPredicted RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 KCNJ9Q92806 393 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 INPP5DQ92835 1189 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 AGAP4Q96P64 663 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 OSBPL9Q96SU4 736 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 CRB3Q9BUF7 120 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 SLC26A1Q9H2B4 701 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 LUZP4Q9P127 313 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 KLHL42Q9P2K6 505 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 TAC3Q9UHF0 121 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 TRMT6Q9UJA5 497 aaKnown RBP9.9□□□□□ -0.82
LINC00564-201ENST00000567258 FBXL4Q9UKA2 621 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 B3GNT3Q9Y2A9 372 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 HECTD1Q9ULT8 2610 aa9.9□□□□□ -0.82
LINC00564-201ENST00000567258 SCN2AQ99250 2005 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 FITM1A5D6W6 292 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 MYO1CO00159 1063 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 CES2O00748 559 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 MAP2K7O14733 419 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SORBS2O94875 1100 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 TTC4O95801 387 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SLC16A8O95907 504 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 UMODP07911 640 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 FBXO45P0C2W1 286 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PGAM1P18669 254 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 GNLYP22749 145 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SKIV2L2P42285 1042 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SLC1A2P43004 574 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 CLCN7P51798 805 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 ABATP80404 500 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PRDX1Q06830 199 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 CUL1Q13616 776 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 FASTKQ14296 549 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 GBX1Q14549 363 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 NDUFA9Q16795 377 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 ICE2Q659A1 982 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SHISA6Q6ZSJ9 500 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 UBE2R2Q712K3 238 aaPredicted RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 RNF44Q7L0R7 432 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PPP1R32Q7Z5V6 425 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 DENND6AQ8IWF6 608 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 MCOLN3Q8TDD5 553 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 COG1Q8WTW3 980 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 ZNF285Q96NJ3 590 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PKP4Q99569 1192 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 GPR21Q99679 349 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PLCD4Q9BRC7 762 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 NAT9Q9BTE0 207 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 KRTAP9-2Q9BYQ4 174 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 EPS8L2Q9H6S3 715 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 PPANQ9NQ55 473 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 IARS2Q9NSE4 1012 aaKnown RBP9.89□□□□□ -0.83
LINC00564-201ENST00000567258 TAS2R13Q9NYV9 303 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 GALPQ9UBC7 116 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 FBXO5Q9UKT4 447 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 DHRS7Q9Y394 339 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 KLK4Q9Y5K2 254 aa9.89□□□□□ -0.83
LINC00564-201ENST00000567258 LOC105369274A0A096LPK9 316 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 LOC102723532A0A0G2JNH3 316 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ZCWPW2A0A1B0GU75 182 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 A0A1W2PPV9 198 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 OR2A25A4D2G3 310 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 KRT87PA6NCN2 255 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 H0YGG7 62 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 EIF3FO00303 357 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 CNOT3O75175 753 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ONECUT2O95948 504 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HIST1H2AGP0C0S8 130 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ZGLP1P0C6A0 271 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms