RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ALOX12BO75342 701 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 ACPPP15309 386 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 CRYMQ14894 314 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 THEMIS2Q5TEJ8 643 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 ADCK2Q7Z695 626 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 C2CD4AQ8NCU7 369 aaPredicted RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 PPP4R1Q8TF05 950 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 WDR77Q9BQA1 342 aaPredicted RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 NAT9Q9BTE0 207 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 ZBTB20Q9HC78 741 aaPredicted RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 C14orf105Q9NVL8 296 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 STOX2Q9P2F5 926 aaPredicted RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 ASIC3Q9UHC3 531 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 PCYOX1Q9UHG3 505 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 TRMT6Q9UJA5 497 aaKnown RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 C3orf18Q9UK00 162 aa19.21■□□□□ 0.67
CLN6-207ENST00000566347 RUVBL1Q9Y265 456 aaKnown RBP19.21■□□□□ 0.67
CLN6-207ENST00000566347 DNALI1O14645 258 aaPredicted RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 MAP2K7O14733 419 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 HPP00738 406 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 ANXA5P08758 320 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 HRH2P25021 359 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 IMPA1P29218 277 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 RGS4P49798 205 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 HKDC1Q2TB90 917 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 IGFL2Q6UWQ7 119 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 PIWIL4Q7Z3Z4 852 aaKnown RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 PARP9Q8IXQ6 854 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 LRRC56Q8IYG6 542 aaPredicted RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 PRSS58Q8IYP2 241 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 CISD2Q8N5K1 135 aaKnown RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 SLCO2A1Q92959 643 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 C19orf60Q96EN9 201 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 CCDC177Q9NQR7 707 aaPredicted RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 ABCF3Q9NUQ8 709 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 CUEDC1Q9NWM3 386 aaPredicted RBP19.2■□□□□ 0.66
CLN6-207ENST00000566347 PCDHGA10Q9Y5H3 936 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 CNTRLQ7Z7A1 2325 aa19.2■□□□□ 0.66
CLN6-207ENST00000566347 PCDH17O14917 1159 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 HAT1O14929 419 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 TCP1P17987 556 aaKnown RBP19.19■□□□□ 0.66
CLN6-207ENST00000566347 VWA2Q5GFL6 755 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 SPANXN3Q5MJ09 141 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 ATG9BQ674R7 924 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 KIAA0408Q6ZU52 694 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 PALM2Q8IXS6 379 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 MCOLN3Q8TDD5 553 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 MMABQ96EY8 250 aaPredicted RBP19.19■□□□□ 0.66
CLN6-207ENST00000566347 THOC3Q96J01 351 aaKnown RBP19.19■□□□□ 0.66
CLN6-207ENST00000566347 CCDC138Q96M89 665 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 YIPF2Q9BWQ6 316 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 DRC3Q9H069 523 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 PCBD2Q9H0N5 130 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 EPS8L2Q9H6S3 715 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 SYNPO2LQ9H987 977 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 MKKSQ9NPJ1 570 aaPredicted RBP19.19■□□□□ 0.66
CLN6-207ENST00000566347 ASF1BQ9NVP2 202 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 TAS2R13Q9NYV9 303 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 TRPC4Q9UBN4 977 aa19.19■□□□□ 0.66
CLN6-207ENST00000566347 COPG1Q9Y678 874 aaKnown RBP19.19■□□□□ 0.66
CLN6-207ENST00000566347 UTP20O75691 2785 aaKnown RBP19.18■□□□□ 0.66
CLN6-207ENST00000566347 HIVEP3Q5T1R4 2406 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 C8GP07360 202 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 SLC26A3P40879 764 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 EMP2P54851 167 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 DHX9Q08211 1270 aaKnown RBP19.18■□□□□ 0.66
CLN6-207ENST00000566347 SP140Q13342 867 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 MRPL49Q13405 166 aaKnown RBP19.18■□□□□ 0.66
CLN6-207ENST00000566347 FAM53BQ14153 422 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 NDUFA9Q16795 377 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 CRB2Q5IJ48 1285 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 CUZD1Q86UP6 607 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 ARHGEF39Q8N4T4 335 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 SSC4DQ8WTU2 575 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 TGIF2Q9GZN2 237 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 DDX47Q9H0S4 455 aaKnown RBP19.18■□□□□ 0.66
CLN6-207ENST00000566347 GRPEL1Q9HAV7 217 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 TMEM184CQ9NVA4 438 aa19.18■□□□□ 0.66
CLN6-207ENST00000566347 IDSB3KWA1 339 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 H7BY64 318 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 CXCR2P25025 360 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 GLRBP48167 497 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 TBPL1P62380 186 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 NR6A1Q15406 480 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 HIF1AQ16665 826 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 EIF2S3LQ2VIR3 472 aaKnown RBP19.17■□□□□ 0.66
CLN6-207ENST00000566347 ISLR2Q6UXK2 745 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 NDUFAF7Q7L592 441 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 LAPTM4BQ86VI4 370 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 CNTN4Q8IWV2 1026 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 KBTBD2Q8IY47 623 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 MYO1HQ8N1T3 1032 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 AMER3Q8N944 861 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 DNAJB14Q8TBM8 379 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 EEF1AKMT1Q8WVE0 214 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 PRAP1Q96NZ9 151 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 NDNQ99608 321 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 PARVBQ9HBI1 364 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 ZNF160Q9HCG1 818 aa19.17■□□□□ 0.66
CLN6-207ENST00000566347 TRMT1Q9NXH9 659 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms