RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ARR3P36575 388 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SREBF1P36956 1147 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SLC15A1P46059 708 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RPP38P78345 283 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 GALEQ14376 348 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MAD2L1BPQ15013 274 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 TSNQ15631 228 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 HADHQ16836 314 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 LIPMQ5VYY2 423 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PADI6Q6TGC4 694 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 KIAA1324Q6UXG2 1013 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 TIGD4Q8IY51 512 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 VWA5B2Q8N398 1253 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SPPL2BQ8TCT7 592 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HOPXQ9BPY8 73 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 C11orf84Q9BUA3 381 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 REG4Q9BYZ8 158 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RACGAP1Q9H0H5 632 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 VCX2Q9H322 139 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PLCXD1Q9NUJ7 323 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ATG4BQ9Y4P1 393 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 FKBP7Q9Y680 259 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 H7C1Q1 480 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TXNL1O43396 289 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HRO43593 1189 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SLC43A1O75387 559 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 GPX5O75715 221 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 F7P08709 466 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 AKAP5P24588 427 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 JAK3P52333 1124 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MAP2K6P52564 334 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 NAGLUP54802 743 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 AIF1P55008 147 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 YBX1P67809 324 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 SEZ6Q53EL9 994 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PRSS36Q5K4E3 855 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SPANXN3Q5MJ09 141 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 BLOC1S3Q6QNY0 202 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SMIM15Q7Z3B0 74 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ADGRG3Q86Y34 549 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 BBS7Q8IWZ6 715 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 WDTC1Q8N5D0 677 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RBPMSQ93062 196 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 AURKBQ96GD4 344 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 CPNE1Q99829 537 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SLC22A4Q9H015 551 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 UCK1Q9HA47 277 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SPAG4Q9NPE6 437 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PCDHA1Q9Y5I3 950 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 A0A096LPK6 155 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ASPDHA6ND91 283 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MAFO75444 373 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 STAU1O95793 577 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 PCCBP05166 539 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HMBSP08397 361 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SLC35E2BP0CK96 405 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RD3LP0DJH9 198 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HK1P19367 917 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TFEBP19484 476 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 GSTM5P46439 218 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 CDK5R2Q13319 367 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ARMC4Q5T2S8 1044 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PIK3R6Q5UE93 754 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PIWIL4Q7Z3Z4 852 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 CLEC10AQ8IUN9 316 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 GPD1LQ8N335 351 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 FRS2Q8WU20 508 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ZC3H10Q96K80 434 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 TRIM54Q9BYV2 358 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SPRTNQ9H040 489 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 PIGUQ9H490 435 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RAB6BQ9NRW1 208 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 IMPAD1Q9NX62 359 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PCOLCE2Q9UKZ9 415 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MAP4K5Q9Y4K4 846 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ALG5Q9Y673 324 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 CASP8AP2Q9UKL3 1982 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 A0A0B4J203 849 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 LRRC72A6NJI9 287 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PPP6CO00743 305 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TBC1D4O60343 1298 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MT-CO1P00395 513 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HLA-DQB1P01920 261 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ANXA5P08758 320 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MGAT1P26572 445 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MIPP30301 263 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HOXA1P49639 335 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 RGS8P57771 180 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 DNAJB13P59910 316 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 BTG1P62324 171 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 GPR19Q15760 415 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TAF2Q6P1X5 1199 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 FIP1L1Q6UN15 594 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 TXNRD3Q86VQ6 643 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MSRB3Q8IXL7 192 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SLC5A11Q8WWX8 675 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SORCS2Q96PQ0 1159 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MED9Q9NWA0 146 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MUTYHQ9UIF7 546 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ZNF541Q9H0D2 1346 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms