RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TUBB8Q3ZCM7 444 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 PRMT9Q6P2P2 845 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 C2CD4AQ8NCU7 369 aaPredicted RBP17.63■□□□□ 0.41
CLN6-204ENST00000564752 DNAJB14Q8TBM8 379 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 CD200R1Q8TD46 325 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 CERS2Q96G23 380 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 LHPPQ9H008 270 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 RNF14Q9UBS8 474 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 CHMP2BQ9UQN3 213 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 DHRS7Q9Y394 339 aa17.63■□□□□ 0.41
CLN6-204ENST00000564752 POLEQ07864 2286 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 ZNF839A8K0R7 811 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 EIF2S1P05198 315 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 ZGLP1P0C6A0 271 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 MPC1LP0DKB6 136 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CMPK1P30085 196 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CARSP49589 748 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 OCA2Q04671 838 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 KLC1Q07866 573 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 Q0VFX4 171 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 ARHGAP19Q14CB8 494 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 PRTGQ2VWP7 1150 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 IRAK1BP1Q5VVH5 260 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 HIBCHQ6NVY1 386 aaPredicted RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 CPNE9Q8IYJ1 553 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 STT3BQ8TCJ2 826 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 SMPDL3AQ92484 453 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 MIEF2Q96C03 454 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CFAP36Q96G28 342 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 SNF8Q96H20 258 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 NDNQ99608 321 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 ZFYVE21Q9BQ24 234 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 MESP1Q9BRJ9 268 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 DPH7Q9BTV6 452 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CRB3Q9BUF7 120 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 ACAT2Q9BWD1 397 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 TRIM31Q9BZY9 425 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 PPANQ9NQ55 473 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 AGPAT4Q9NRZ5 378 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 STOX2Q9P2F5 926 aaPredicted RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 ZNF282Q9UDV7 671 aaPredicted RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 TRMT6Q9UJA5 497 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 NOVA2Q9UNW9 492 aaKnown RBP17.62■□□□□ 0.41
CLN6-204ENST00000564752 SLC5A6Q9Y289 635 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CNTRLQ7Z7A1 2325 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 PCM1Q15154 2024 aa17.62■□□□□ 0.41
CLN6-204ENST00000564752 CENPEQ02224 2701 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 IGLV3-12A0A075B6K2 115 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 EIF3FO00303 357 aaPredicted RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 FANCGO15287 622 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 SYF2O95926 243 aaKnown RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 RPA3P35244 121 aaPredicted RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 HSD17B2P37059 387 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 ELK3P41970 407 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 TSFMP43897 325 aaKnown RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 ITGA8P53708 1063 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 EMP3P54852 163 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 ARL4CP56559 192 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 ELOAQ14241 798 aaKnown RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 MUM1Q2TAK8 710 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 HP1BP3Q5SSJ5 553 aaPredicted RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 ATG9BQ674R7 924 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 UGT3A1Q6NUS8 523 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 SUSD1Q6UWL2 747 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 KIAA0408Q6ZU52 694 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 IGDCC3Q8IVU1 814 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 CNTN4Q8IWV2 1026 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 FBXO15Q8NCQ5 510 aaPredicted RBP17.61■□□□□ 0.41
CLN6-204ENST00000564752 LRRC39Q96DD0 335 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 C10orf90Q96M02 699 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 PWWP2AQ96N64 755 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 PKP4Q99569 1192 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 PLCD4Q9BRC7 762 aa17.61■□□□□ 0.41
CLN6-204ENST00000564752 CACNA1DQ01668 2161 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 MYO9AB2RTY4 2548 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 EFCAB8A8MWE9 144 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 H0YGG7 62 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 ZBTB14O43829 449 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 CLDN1O95832 211 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 HPP00738 406 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 PNLIPRP1P54315 467 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 ARF3P61204 181 aaPredicted RBP17.6■□□□□ 0.41
CLN6-204ENST00000564752 LRRC8EQ6NSJ5 796 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 MAMDC2Q7Z304 686 aaPredicted RBP17.6■□□□□ 0.41
CLN6-204ENST00000564752 PIWIL4Q7Z3Z4 852 aaKnown RBP17.6■□□□□ 0.41
CLN6-204ENST00000564752 SPNS2Q8IVW8 549 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 ST6GALNAC3Q8NDV1 305 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 ASB11Q8WXH4 323 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 C5orf34Q96MH7 638 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 LMF1Q96S06 567 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 KRT12Q99456 494 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 EPS8L2Q9H6S3 715 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 MRPS30Q9NP92 439 aaKnown RBP17.6■□□□□ 0.41
CLN6-204ENST00000564752 TAS2R13Q9NYV9 303 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 C3orf18Q9UK00 162 aa17.6■□□□□ 0.41
CLN6-204ENST00000564752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLN6-204ENST00000564752 ITPR2Q14571 2701 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 IGKV1-8A0A0C4DH67 115 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms