RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 FAM53BQ14153 422 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 VWA2Q5GFL6 755 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 B3GNTL1Q67FW5 361 aaPredicted RBP16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 AMER3Q8N944 861 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 GRK7Q8WTQ7 553 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 CABS1Q96KC9 395 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 GPR21Q99679 349 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 EBNA1BP2Q99848 306 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 C20orf96Q9NUD7 363 aaPredicted RBP16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 MAP10Q9P2G4 905 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 NOVA2Q9UNW9 492 aaKnown RBP16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 CSAG2Q9Y5P2 127 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 HIVEP3Q5T1R4 2406 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 ICE1Q9Y2F5 2266 aa16.38■□□□□ 0.21
VPS9D1-203ENST00000563798 KCNE1BA0A087WTH5 132 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 SMAPO00193 183 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 CES2O00748 559 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 MAP2K7O14733 419 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 FOXS1O43638 330 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 HAUS5O94927 633 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 FDXRP22570 491 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 HRH2P25021 359 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 MFAP5Q13361 173 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 CUL1Q13616 776 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 HIF1AQ16665 826 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 HKDC1Q2TB90 917 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 RNASEH2BQ5TBB1 312 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 LRRC8EQ6NSJ5 796 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 ISLR2Q6UXK2 745 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 NDUFAF7Q7L592 441 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 LAPTM4BQ86VI4 370 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 PRR7Q8TB68 274 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 THOC3Q96J01 351 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 MESP1Q9BRJ9 268 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 FAM167BQ9BTA0 163 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 AARSD1Q9BTE6 412 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 EPS8L2Q9H6S3 715 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 MKKSQ9NPJ1 570 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 AGPAT4Q9NRZ5 378 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 MAD1L1Q9Y6D9 718 aa16.37■□□□□ 0.21
VPS9D1-203ENST00000563798 HEATR5BQ9P2D3 2071 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 DOPEY1Q5JWR5 2465 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 LOC102723996A0A087X1L8 192 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 ANKUB1A6NFN9 424 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 IDSB3KWA1 339 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 COX6A1P12074 109 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 IMPA1P29218 277 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 GLRBP48167 497 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 EMP2P54851 167 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 TIAL1Q01085 375 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 ZNF169Q14929 603 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 TLR1Q15399 786 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 RPUSD3Q6P087 351 aaKnown RBP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 KBTBD2Q8IY47 623 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 C2CD4AQ8NCU7 369 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 PPFIBP2Q8ND30 876 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 ST6GALNAC3Q8NDV1 305 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 PSMF1Q92530 271 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 RERGQ96A58 199 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 OSBPL9Q96SU4 736 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 DRC3Q9H069 523 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 ZNF160Q9HCG1 818 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 TMEM184CQ9NVA4 438 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 TRPC4Q9UBN4 977 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 PCYOX1Q9UHG3 505 aa16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 ERRFI1Q9UJM3 462 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-203ENST00000563798 KLHL18O94889 574 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 LDLRP01130 860 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 SERPINA7P05543 415 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 CYC1P08574 325 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 F7P08709 466 aaPredicted RBP16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 PGAM1P18669 254 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 SOX11P35716 441 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 MPP1Q00013 466 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 PTK6Q13882 451 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 C4orf17Q53FE4 359 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 HSP90AA5PQ58FG0 334 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 UGT3A1Q6NUS8 523 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 TMEM205Q6UW68 189 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 RIPOR1Q6ZS17 1223 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 UBE2R2Q712K3 238 aaPredicted RBP16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 PIWIL4Q7Z3Z4 852 aaKnown RBP16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 KCNMB4Q86W47 210 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 CPNE9Q8IYJ1 553 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 PRSS58Q8IYP2 241 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 SLCO2A1Q92959 643 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 C8orf44Q96CB5 159 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 THAP11Q96EK4 314 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 CCDC138Q96M89 665 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 PCBD2Q9H0N5 130 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 SLC5A6Q9Y289 635 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 UNC79Q9P2D8 2635 aa16.35■□□□□ 0.21
VPS9D1-203ENST00000563798 POLEQ07864 2286 aa16.34■□□□□ 0.21
VPS9D1-203ENST00000563798 IGHV1-45A0A0A0MS14 117 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms