RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MOAP1Q96BY2 351 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 LRRC39Q96DD0 335 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NUDT11Q96G61 164 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF274Q96GC6 653 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CDKN2AIPNLQ96HQ2 116 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NUDCD1Q96RS6 583 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 DDOQ99489 341 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CPNE1Q99829 537 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MTG1Q9BT17 334 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 SIRPDQ9H106 197 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ROPN1Q9HAT0 212 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 YAE1D1Q9NRH1 226 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ASNSD1Q9NWL6 643 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FBXO4Q9UKT5 387 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MGAT4BQ9UQ53 548 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PFASO15067 1338 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 PLIN4Q96Q06 1357 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A0U1RQV5 110 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TEX51A0A1B0GUA7 166 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 FEZF1A0PJY2 475 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ASB14A6NK59 587 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MEI4A8MW99 385 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 GRXCR1A8MXD5 290 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 GOLGA8SH3BPF8 625 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ETV2O00321 342 aaPredicted RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 LRRTM2O43300 516 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 CIDEAO60543 219 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SNNO75324 88 aaPredicted RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 RHOBTB1O94844 696 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 KDM4BO94953 1096 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SPDEFO95238 335 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 OTCP00480 354 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 UGT2B4P06133 528 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MYZAPP0CAP1 466 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF888P0CJ79 500 aaPredicted RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MED14OSP0DP75 135 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 RALBP11234 206 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 CREB1P16220 341 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 NMBRP28336 390 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 USP8P40818 1118 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC11A1P49279 550 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 METAP2P50579 478 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ADPRHP54922 357 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SORDQ00796 357 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 DMWDQ09019 674 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 DNAJC3Q13217 504 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SHBQ15464 509 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM41BQ5BJD5 291 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 DCST1Q5T197 706 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 AGBL4Q5VU57 503 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MFSD14CQ5VZR4 134 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 EFCAB12Q6NXP0 572 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 AADACL2Q6P093 401 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 AAGABQ6PD74 315 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MDGA2Q7Z553 956 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ADGRD2Q7Z7M1 963 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ASPGQ86U10 573 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TBC1D26Q86UD7 250 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 IGFN1Q86VF2 1251 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 CENPLQ8N0S6 344 aaPredicted RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 CADM3Q8N126 398 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TRIML2Q8N7C3 387 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 RDM1Q8NG50 284 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 OR52J3Q8NH60 311 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 WDR20Q8TBZ3 569 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 RAET1EQ8TD07 263 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TRPC4APQ8TEL6 797 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 LPPQ93052 612 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 THOC3Q96J01 351 aaKnown RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 C8orf76Q96K31 380 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MS4A10Q96PG2 267 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 PNKPQ96T60 521 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 NEU1Q99519 415 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM47Q9BQJ4 181 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 OR10A2Q9H208 303 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TOR3AQ9H497 397 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 SFXN1Q9H9B4 322 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TBC1D17Q9HA65 648 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 TRIM36Q9NQ86 728 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 ABHD10Q9NUJ1 306 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 COPG2Q9UBF2 871 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 IL20RAQ9UHF4 553 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 C15orf41Q9Y2V0 281 aa5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.01□□□□□ -1.61
VPS35P1-201ENST00000563400 MAST2Q6P0Q8 1798 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A0A0MQY5 61 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A0U1RRA0 63 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 LOC100653049A0A140TA62 436 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 A1L4Q6 167 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CPED1A4D0V7 1026 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 OR6C74A6NCV1 312 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 WRBO00258 174 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CLDN4O14493 209 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF217O75362 1048 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 VPS26AO75436 327 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 PMPCBO75439 489 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CSDE1O75534 798 aaKnown RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 KRT34O76011 436 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms