RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SLC26A3P40879 764 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 GDF5P43026 501 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 MSH2P43246 934 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 VSX2P58304 361 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 ARF3P61204 181 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 VSNL1P62760 191 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 CYP4F2P78329 520 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 NFKB2Q00653 900 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 TGFBIQ15582 683 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PRTGQ2VWP7 1150 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PTCHD3Q3KNS1 767 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ZC3H12BQ5HYM0 836 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 WASHC2DQ5SRD0 308 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 THEMIS2Q5TEJ8 643 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 C1orf189Q5VU69 101 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 CAPN13Q6MZZ7 669 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 TLDC1Q6P9B6 456 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PCSK4Q6UW60 755 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 FAM198BQ6UWH4 519 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 RAPH1Q70E73 1250 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 VN1R4Q7Z5H5 301 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ADAMTSL2Q86TH1 951 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 GPSM1Q86YR5 675 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PLD3Q8IV08 490 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 TMEM151BQ8IW70 566 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 GPR135Q8IZ08 494 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 ABHD11Q8NFV4 315 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 OR4K1Q8NGD4 311 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 KCTD4Q8WVF5 259 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ATL1Q8WXF7 558 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 ATOH8Q96SQ7 321 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ZFYVE21Q9BQ24 234 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 TMEM79Q9BSE2 394 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PCBD2Q9H0N5 130 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 SPNS1Q9H2V7 528 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ALG9Q9H6U8 611 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 GPN2Q9H9Y4 310 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 TMEM184CQ9NVA4 438 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 DHCR7Q9UBM7 475 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 ACOT9Q9Y305 439 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 AP1M2Q9Y6Q5 423 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 PCM1Q15154 2024 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 BOD1L1Q8NFC6 3051 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 KCNE1BA0A087WTH5 132 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 A0A087X1B8 175 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 FER1L5A0AVI2 2057 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NCF1BA6NI72 391 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 NCF1CA8MVU1 366 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 C21orf140B9A014 251 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 TRIM49D1C9J1S8 452 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 PRAMEF4O60810 478 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CNOT3O75175 753 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 RFPL1O75677 317 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 SHBGP04278 402 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 INHBAP08476 426 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ANXA5P08758 320 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 HBQ1P09105 142 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 FURINP09958 794 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 LTA4HP09960 611 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 CCNYL3P0C7X3 344 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CDH1P12830 882 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NCF1P14598 390 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 EZRP15311 586 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 EPORP19235 508 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 TFEBP19484 476 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CCND1P24385 295 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 HRH2P25021 359 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 TYK2P29597 1187 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 BCL6P41182 706 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 HNMTP50135 292 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 SERPINB8P50452 374 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 SERPINB9P50453 376 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 RPS18P62269 152 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 DNASE1L3Q13609 305 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 HKDC1Q2TB90 917 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 FBXO48Q5FWF7 155 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 TCTE1Q5JU00 501 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CDKL4Q5MAI5 379 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CATSPEREQ5SY80 951 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ATP1A1-AS1Q5TC04 95 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 PRAMEF9Q5VWM5 478 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ADGRD1Q6QNK2 874 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 GPR155Q7Z3F1 870 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 THOC6Q86W42 341 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 C17orf64Q86WR6 236 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 PDPRQ8NCN5 879 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ZNF740Q8NDX6 193 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 MZB1Q8WU39 189 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 TTC9Q92623 222 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 N4BP2L2Q92802 583 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 MR1Q95460 341 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NEIL2Q969S2 332 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms