RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 UBE2FQ969M7 185 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 C1orf74Q96LT6 269 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 ZYG11BQ9C0D3 744 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 CCSER2Q9H7U1 834 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
CLK3-206ENST00000562078 CCDC182A6NF36 153 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PIP5K1BO14986 540 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 EFCAB14O75071 495 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 SUPT7LO94864 414 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 HGFP14210 728 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 CHRNA4P43681 627 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 FOXA1P55317 472 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 HYAL2Q12891 473 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 DUSP4Q13115 394 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PRSS55Q6UWB4 352 aaPredicted RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 OR8H3Q8N146 312 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 PCNPQ8WW12 178 aaKnown RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 RIBC2Q9H4K1 309 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TLR8Q9NR97 1041 aaKnown RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 RASSF1Q9NS23 344 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TNFRSF10DQ9UBN6 386 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PTPRSQ13332 1948 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 ANAPC1Q9H1A4 1944 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 A0A1W2PQ09 198 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 LINC00862A6NCI5 91 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 J3KR12 359 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 LINC01387J3KSC0 135 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 ZNF37AP17032 561 aaPredicted RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 RHOQP17081 205 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TNFSF8P32971 234 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 KRT20P35900 424 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 DCTP40126 519 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PIK3CBP42338 1070 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 MTPNP58546 118 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 HOXC5Q00444 222 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 ZNF33BQ06732 778 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 GPR17Q13304 367 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TAF12Q16514 161 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 SETMARQ53H47 684 aaPredicted RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 BRAT1Q6PJG6 821 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TAS1R1Q7RTX1 841 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 SYVN1Q86TM6 617 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PHYKPLQ8IUZ5 450 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 UMODL1-AS1Q8N2C9 162 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 ST8SIA2Q92186 375 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 IGSF8Q969P0 613 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PTERQ96BW5 349 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 TBATAQ96M53 351 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 CHCHD6Q9BRQ6 235 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 CWH43Q9H720 699 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 NT5MQ9NPB1 228 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 COL4A6Q14031 1691 aa12.91□□□□□ -0.34
CLK3-206ENST00000562078 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
CLK3-206ENST00000562078 RGS5O15539 181 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SLC22A5O76082 557 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 CDK14O94921 469 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ANXA6P08133 673 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 HOXD4P09016 255 aaPredicted RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 ATF6P18850 670 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ADRA1AP35348 466 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PPP3CCP48454 512 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 KCNK10P57789 538 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 MAXP61244 160 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 SH3BP2P78314 561 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 TECRLQ5HYJ1 363 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PCID2Q5JVF3 399 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 ZBTB37Q5TC79 503 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PKN3Q6P5Z2 889 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 KBTBD8Q8NFY9 601 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 KCNA7Q96RP8 456 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 POLMQ9NP87 494 aaPredicted RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.9□□□□□ -0.34
CLK3-206ENST00000562078 BTRCQ9Y297 605 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 A0A096LPI6 279 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 B4DXG7 233 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 BTN3A3O00478 584 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 KATNA1O75449 491 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 MATN4O95460 622 aa12.9□□□□□ -0.34
CLK3-206ENST00000562078 PEX11BO96011 259 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms