RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 RMND5AQ9H871 391 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 SLC22A14Q9Y267 594 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 KCNE1BA0A087WTH5 132 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TCRBV5S2A0A599 114 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TCRBV21S2A2A0A5A6 115 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 SGTAO43765 313 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 MTX2O75431 263 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 E2F6O75461 281 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CATP04040 527 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 BCKDHAP12694 445 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 JUPP14923 745 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 HOXB6P17509 224 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PRLHRP49683 370 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 RPS14P62263 151 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TMEM115Q12893 351 aaPredicted RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ENPP2Q13822 863 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PTGR1Q14914 329 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ADRM1Q16186 407 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 FAM174BQ3ZCQ3 159 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 LIN52Q52LA3 116 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 FRG2Q64ET8 278 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CYP2U1Q7Z449 544 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 MFSD2AQ8NA29 543 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PRSS33Q8NF86 280 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TSTD1Q8NFU3 115 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 BIRC7Q96CA5 298 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 MTFMTQ96DP5 389 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 METTL2AQ96IZ6 378 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CCDC115Q96NT0 180 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 GABRG3Q99928 467 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 IER2Q9BTL4 223 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PRMT8Q9NR22 394 aaPredicted RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 UBAP1Q9NZ09 502 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 MBD1Q9UIS9 605 aaPredicted RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 PLXNA2O75051 1894 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 EDDM13A0A1B0GTR0 161 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 C7orf72A4D263 438 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 FADS2P1A8MWK0 482 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 KPNA3O00505 521 aaPredicted RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 MSL3P1P0C860 447 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 HALP42357 657 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 DGKEP52429 567 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 YBX1P67809 324 aaKnown RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 TCF15Q12870 199 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 CSTF3Q12996 717 aaKnown RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 MSANTD1Q6ZTZ1 278 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 FKBP9P1Q75LS8 142 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 ZNF765Q7L2R6 523 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 KLHDC8AQ8IYD2 350 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 OR8D1Q8WZ84 308 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 PPP1R16AQ96I34 528 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 MPP4Q96JB8 637 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 OR52E6Q96RD3 313 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 BDH2Q9BUT1 245 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 THUMPD3Q9BV44 507 aaKnown RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 MRPS26Q9BYN8 205 aaKnown RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 TPSD1Q9BZJ3 242 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 YIPF3Q9GZM5 350 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 MKRN2Q9H000 416 aaKnown RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 GORASP2Q9H8Y8 452 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.24□□□□□ -0.61
PCAT1-202ENST00000561978 KLF15Q9UIH9 416 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 PADI4Q9UM07 663 aa11.24□□□□□ -0.61
PCAT1-202ENST00000561978 KNL1Q8NG31 2342 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 RNF103-CHMP3A0A140T963 221 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 SMIM31A0A1B0GVY4 71 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 GSTA4O15217 222 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 CLPTM1O96005 669 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 LDLRP01130 860 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 ANXA6P08133 673 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
PCAT1-202ENST00000561978 CDH1P12830 882 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 ITGB7P26010 798 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 S100A3P33764 101 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 HNF4AP41235 474 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 RPL5P46777 297 aaKnown RBP11.23□□□□□ -0.61
PCAT1-202ENST00000561978 CCT8P50990 548 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 HNRNPFP52597 415 aaKnown RBP11.23□□□□□ -0.61
PCAT1-202ENST00000561978 PFN3P60673 137 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 IRF8Q02556 426 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 ABRQ12979 859 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 CHIT1Q13231 466 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 STARD3Q14849 445 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 ATP6AP1Q15904 470 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
PCAT1-202ENST00000561978 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
PCAT1-202ENST00000561978 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms